ggKbase home page

scnpilot_expt_750_bf_scaffold_803_25

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(24310..26280)

Top 3 Functional Annotations

Value Algorithm Source
Fis family GAF modulated sigma54 specific transcriptional regulator id=12493177 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 678.0
  • Bit_score: 1282
  • Evalue 0.0
  • rbh
Fis family GAF modulated sigma54 specific transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 666.0
  • Bit_score: 719
  • Evalue 4.90e-204
transcription regulator protein similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 640.0
  • Bit_score: 507
  • Evalue 5.90e-141

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1971
ATGGAACGACAGGACATCCCGGATCTCGCCCGCCTGGCCCGCCCCGTCGTCGATCTGGATCATTCCGTCAAACCGGTGGCGGTACAGCCTTTCATCATTCGCTCATGGCATCGCTGCCTCCACGAGTTCGGCCTCGACCCGGACAGTGACCAGCCTGTGGCCAGAGTGGATCCCGACGATCTCAAGATTCGCCGGGAACGCCTGGGACGCTCGCGGGCCATTGCCAGGGAAGAGATGGCCAGTCTTGACCAGCAGCTTGCCGGTTCAGGCTGCTCGGTCCTGCTTGCCGATCCGGACGGCGTCGTGCTGGACCTGATCGGCGATCCGGCTTGCCGCGACAGCGCCATGGCACACGGTCTGGTTCAAGGGGCCAACTGGAGCGAGCGCCACCGGGGTACCAACAGCCTGGGCACGTGCGCCATCGAGCAGCAGCCCGTTCTGGTCCATCACAGCGAGCATTTCCTGTCCCGTCACGTCGATCTGACCGGTTCCGCTGCCCCCGTTTTCGACCATGAGGGCAAGCTGCTGGCGGTACTGAATGCCTCCAGTTTCTCCCGGATGACCCAGCAGCACACGCTGGCGCTGATCGAGGTGTCAGCCCGGATGATTGAGAATCGGGCCTTCCTCGGCCACTTCCGCAAGCACTACGTCCTGCGCTTCCATAGCCACCCCGAGGTCATAGGCAGCGTACGGGAAGGCATACTGGCGCTGGACGAAAGCGGCCGTGTTCTGGCCGCCAATCGCAGCGCGCGCGCGCTGCTGGGATTGACACGCACCGATGTTCTGGCAGGTCGCACGTTGCCAATGCTGTTCAACATCGGAATAGAAGGCTTGCTGAGCCGGAAGAACCGGGCCTGGCTCGCGCCCCTTCCCCTTTATGAGGCCCGCCACGGCAACCGTTTCTACTCGCTGCTCACACTGCCGAAAAACAGCAGCTTTTCCCTGGCCACCAATACGCCGCGCCAGTCCGTTCAACCCGTCAACGCGCCCCCGCGCGGGGGCTTTCCAATCGTTCACCTGGACAAGCTGCAATTCGGCGAGCCCCGCATGGCATACAACGTTCAGTGCGCCAGGCGCGTGCTGAACCAGGACATCCCCATTCTGCTCATGGGAGAAACCGGCACCGGCAAGGAGGTGTTCGCCAAAGCCGTCCACGCGGAATATGCCGGCGCCGGCCGGCCCTTCGTGGCGGTCAATTGCGTGGCGATTCCCGAATCCCTGATCGAGAGCGAACTGTTCGGCTACGCCTCCGGCGCCTTCACCGGCGCCAGTCGGGGCGGGCAACGGGGCAAGATCCTCCAGGCCCACGGCGGCACGCTTTTTCTGGATGAAATTGGCGATATGCCGCTCCTGCTCCAGGCGCGCCTGCTGCGTGTACTGGAAGAACGCGAGGTGGTGCCGCTGGGGGGAGAATCTCCGGTCAAGATAGACATCAAGCTCATCAGCGCCACCCACCGCAACCTCAAGGAACTGGTCGCGGAAGGGAAATTCCGTGAGGATTTGTACTACCGTCTGCAGGGCATCAGTCTCACCTTGCCGCCCCTGAGGGCGCGCCGGGATCGCCAGGCGATCATCGGCCACCTCATCACTCTGGAAGCCAACGGCGCCCCGGTCCGCTTGTCCGCCGCGGCCATGAAATGCCTCGACGCTTACGACTGGCCCGGCAACTTCCGTCAACTGCGCAACGTGCTGCGGACCATACTGGCGCTTCGGGAGGGCGATGAAATCAATGTTCGTGATCTACCCGAGGAATTCTCCGCCTGCAGCGCGAAAACGGCCGTGCAAATGACCGACGAATCCCCGGCAGCCGAGGCCGAAACAACAGGGTTTGGCCAGGACGAGCCTGAAGCGACAGCGATGGACGAGTGGGAAGGCGTCCATCTGTCCGCCCCGGAGGCCGCGGAGCGAATCGTGATTCTTCAGACTCTGAAAGACAAGATGAAGAATCTCAGCATCGATCTCAACGGCTGA
PROTEIN sequence
Length: 657
MERQDIPDLARLARPVVDLDHSVKPVAVQPFIIRSWHRCLHEFGLDPDSDQPVARVDPDDLKIRRERLGRSRAIAREEMASLDQQLAGSGCSVLLADPDGVVLDLIGDPACRDSAMAHGLVQGANWSERHRGTNSLGTCAIEQQPVLVHHSEHFLSRHVDLTGSAAPVFDHEGKLLAVLNASSFSRMTQQHTLALIEVSARMIENRAFLGHFRKHYVLRFHSHPEVIGSVREGILALDESGRVLAANRSARALLGLTRTDVLAGRTLPMLFNIGIEGLLSRKNRAWLAPLPLYEARHGNRFYSLLTLPKNSSFSLATNTPRQSVQPVNAPPRGGFPIVHLDKLQFGEPRMAYNVQCARRVLNQDIPILLMGETGTGKEVFAKAVHAEYAGAGRPFVAVNCVAIPESLIESELFGYASGAFTGASRGGQRGKILQAHGGTLFLDEIGDMPLLLQARLLRVLEEREVVPLGGESPVKIDIKLISATHRNLKELVAEGKFREDLYYRLQGISLTLPPLRARRDRQAIIGHLITLEANGAPVRLSAAAMKCLDAYDWPGNFRQLRNVLRTILALREGDEINVRDLPEEFSACSAKTAVQMTDESPAAEAETTGFGQDEPEATAMDEWEGVHLSAPEAAERIVILQTLKDKMKNLSIDLNG*