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scnpilot_expt_750_bf_scaffold_803

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_803_1
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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495..1193
DNA (699bp) protein (233aa)
glutathione S-transferase domain-containing protein id=12493170 bin=THIO_HI species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Glutathione S-transferase domain protein {ECO:0000313|EMBL:CCV06081.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
glutathione S-transferase domain-containing protein
scnpilot_expt_750_bf_scaffold_803_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1290..3068
DNA (1779bp) protein (593aa)
hypothetical protein id=12493171 bin=THIO_HI species=unknown genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX20980.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
scnpilot_expt_750_bf_scaffold_803_3
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3182..3673
DNA (492bp) protein (164aa)
hypothetical protein id=12493172 bin=THIO_HI species=unknown genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:CDX20012.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_803_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3740..5068
DNA (1329bp) protein (443aa)
hypothetical protein id=12493173 bin=THIO_HI species=unknown genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX20976.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
scnpilot_expt_750_bf_scaffold_803_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5065..5889
DNA (825bp) protein (275aa)
hypothetical protein; K06864 uncharacterized protein id=12493174 bin=THIO_HI species=Smaragdicoccus niigatensis genus=Smaragdicoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Pp-loop domain protein {ECO:0000313|EMBL:CDX35099.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
protein of unassigned function
scnpilot_expt_750_bf_scaffold_803_6
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5886..6641
DNA (756bp) protein (252aa)
putative circadian phase modifier CpmA-like protein; K06898 id=12493175 bin=THIO_HI species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Putative circadian phase modifier CpmA-like protein
Putative circadian phase modifier CpmA-like protein {ECO:0000313|EMBL:AIQ89473.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacteri
scnpilot_expt_750_bf_scaffold_803_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6749..7987
DNA (1239bp) protein (413aa)
putative long-chain fatty acid transport protein id=12493176 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
putative long-chain fatty acid transport protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
long-chain fatty acid transport protein
scnpilot_expt_750_bf_scaffold_803_8
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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8183..8671
DNA (489bp) protein (163aa)
Phage-related integrase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YCR8_9RHOO
Phage-related integrase {ECO:0000313|EMBL:ENO89305.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lo
phage integrase family protein
scnpilot_expt_750_bf_scaffold_803_9
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9024..9515)
DNA (492bp) protein (164aa)
LysR family transcriptional regulator n=1 Tax=Cupriavidus sp. WS RepID=UPI0003658AD3
bacterial regulatory helix-turn-helix , lysR family protein
LysR substrate-binding domain protein {ECO:0000313|EMBL:KAK83184.1}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
scnpilot_expt_750_bf_scaffold_803_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9735..10508
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5S4_ACISJ rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABM41599.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
scnpilot_expt_750_bf_scaffold_803_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10584..10865
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5S3_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM41598.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
scnpilot_expt_750_bf_scaffold_803_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10981..11409
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF77 RepID=U8BGK3_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KIL05096.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri
anti-ECF sigma factor ChrR
scnpilot_expt_750_bf_scaffold_803_13
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11468..11977
DNA (510bp) protein (170aa)
Amine oxidase n=2 Tax=Proteobacteria RepID=A1W5R9_ACISJ
amine oxidase
Putative amine oxidase {ECO:0000313|EMBL:CAJ24008.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campest
scnpilot_expt_750_bf_scaffold_803_14
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11994..13013
DNA (1020bp) protein (340aa)
Zn-dependent alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase GroES domain protein n=2 Tax=Proteobacteria RepID=A1W5R7_ACISJ rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ABM41592.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
scnpilot_expt_750_bf_scaffold_803_15
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13287..14513
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF77 RepID=U8BGJ9_PSEAI rbh
MFS transporter {ECO:0000313|EMBL:KGH10006.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomona
hypothetical protein
scnpilot_expt_750_bf_scaffold_803_16
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14592..15110
DNA (519bp) protein (173aa)
Carboxymuconolactone decarboxylase n=2 Tax=Proteobacteria RepID=A1W5Q3_ACISJ
carboxymuconolactone decarboxylase
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ABM41578.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
scnpilot_expt_750_bf_scaffold_803_17
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15293..16135
DNA (843bp) protein (281aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadace
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UAG9_XANAP
scnpilot_expt_750_bf_scaffold_803_18
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16197..17525)
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF77 RepID=U8BGF0_PSEAI rbh
integral membrane sensor signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_803_19
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17522..18190)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF77 RepID=U8BGK4_PSEAI rbh
Transcriptional regulator {ECO:0000313|EMBL:KIL05108.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzer
armR; ArmR, DNA-binding response regulator
scnpilot_expt_750_bf_scaffold_803_20
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18337..20262
DNA (1926bp) protein (642aa)
Thiol:disulfide interchange protein DsbD n=2 Tax=Proteobacteria RepID=Q1LKQ5_RALME rbh
Thiol:disulfide interchange protein {ECO:0000313|EMBL:KIL05109.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomon
dsbD; Thiol:disulfide interchange protein
scnpilot_expt_750_bf_scaffold_803_21
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20259..21077
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF77 RepID=U8BIC3_PSEAI rbh
Redoxin {ECO:0000313|EMBL:KFJ91403.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
redoxin domain-containing protein
scnpilot_expt_750_bf_scaffold_803_22
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21103..21876
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF77 RepID=U8BIK4_PSEAI rbh
Dihydroneopterin aldolase {ECO:0000313|EMBL:KIL05111.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzer
dsbG; disulfide isomerase/thiol-disulfide oxidase rbh
scnpilot_expt_750_bf_scaffold_803_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21970..22800
DNA (831bp) protein (277aa)
LysR-family transcriptional regulator TraR n=11 Tax=Pseudomonas aeruginosa RepID=M2ZS83_PSEAI
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:ETD48023.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomo
LysR-family transcriptional regulator TraR
scnpilot_expt_750_bf_scaffold_803_24
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23678..23923
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4XEP1_PSEDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI23805.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denit
scnpilot_expt_750_bf_scaffold_803_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24310..26280)
DNA (1971bp) protein (657aa)
Fis family GAF modulated sigma54 specific transcriptional regulator id=12493177 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Fis family GAF modulated sigma54 specific transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transcription regulator protein
scnpilot_expt_750_bf_scaffold_803_26
unknown

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26464..26610
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_803_27
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26897..28687
DNA (1791bp) protein (597aa)
hypothetical protein id=12493178 bin=THIO_HI species=unknown genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENN88306.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
scnpilot_expt_750_bf_scaffold_803_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(28777..29718)
DNA (942bp) protein (314aa)
hypothetical protein id=12493179 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96973.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
scnpilot_expt_750_bf_scaffold_803_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(29719..30789)
DNA (1071bp) protein (357aa)
selenophosphate synthetase (EC:2.7.9.3); K01008 selenide, water dikinase [EC:2.7.9.3] id=12493180 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
selenophosphate synthetase (EC:2.7.9.3); K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
selenophosphate synthetase (EC:2.7.9.3)
scnpilot_expt_750_bf_scaffold_803_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30853..32013
DNA (1161bp) protein (387aa)
hypothetical protein id=12493181 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
Displaying items 1-30 of 50 in total

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