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scnpilot_expt_750_bf_scaffold_1545_7

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 4767..6272

Top 3 Functional Annotations

Value Algorithm Source
NodT family RND efflux system, outer membrane lipoprotein id=12495448 bin=THIO_HI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 502.0
  • Bit_score: 952
  • Evalue 1.90e-274
  • rbh
RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 458.0
  • Bit_score: 480
  • Evalue 7.70e-133
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EJE50574.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 464.0
  • Bit_score: 480
  • Evalue 2.90e-132

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1506
ATGAACGGCCGCCCCGTACCACGCCTCGCGCTCCACTTTCTGACGTTGAGCCTGACCGCTGCGCTGGCCGGCTGCGCCAACCCAGGGCCGGCGCCCGAATTGCCCGTCAGCGCCGTGCCGACGCAGTGGTCGGCCGGCGGCGCTGCACAGCCGCAGTCGCAGTCGCCAACCGAGCTGGCCGCCTGGTGGCGGCGCTTCGGCGACGCCGAGCTGAGCGCGCTGATCGACGACGCGCTGGCCCACAACCCCGGCGTGCGGTCGGCCCTGGCGGCACTGCGCCAGTCGCGCGCGCTGGCCGACGTCGCCGCCGCCGCGCTGGCGCCCAGCCTGGACGGCTCGGGCTCGGCCCAGCGCAGCCACAGCGATGGCGGCGGCACTTACAACAACTTCGGCCTCGGGCTGGACGCCAGCTGGGAGCCCGACCTGTCGGGCGGCCTGCGGGCCGGCGCCCGCGCCGCCGAGAGCGACGCCCGCGCCGCGCAGATGAGCCTGGGCCAGGTGCAGGTATCGCTGGCGGCCGAAGTGGCGCTGGCCTACGTCGACCTGCGCGATCAGCAGGCGCGTCTGCTGATCGCGCAGGACAACCTGGCGACGCAGGACGACACGCTGCAGATCGCGCGCTGGCGCCAGCAGGCCGGCCTGGTGTCGATGCTCGACGTCGAGCAGGCGGCCACCCTGGCCGAGCAGACGCGCGCCCAGCTGCCGCTGCGCCAGACCGCCGTGGCGCAGGCGCGCCACCGGCTGGCGGTGCTCACCGGCCGCCCGCCGGGCGCGCTGACGTTCACGCCGGCGCCGGTGCCGCTGCCGCCCGACGACCTGGTGCTGGCCTTTCCGGCCGACACGCTGCGCCAGCGGCCCGACGTGCGCCAGAGCGAGGCCCAGCTGCAGGCCGCCTGGGCGCGCGTGGCGCAGGCCGACGCCGCGCGCTACCCTTCGCTGCGGCTGTCGGGAACGCTCGGGCTGCAGTCGCTGTCGACCGGGTCGCTGCTGAACGGCTCCAGCGTGGTGGCGTCGATGCTGGCCGGGCTGACGCAGCCGATCTTCGACGGCGGCGCCATCGCCGGCCGCCTGCGCGCGCAACAGGCCGCACTGGATCAGGCCAGCGCCAACCACCACACCAGCGTGCTGGCCGCGCTGCAGGAGGTGGAAGACGCACTGGTCGCGCTGCAGGGCGACCGTGCACGCATCGGCAGCCTGCAGGCCGCGGCCGTGGCGGCGCGCAACGCCGAGCAGTTGGCGCGTCAGCAATACCAGGCCGGGCTGATCGGCTTCGACGTCGTGCTGCAGGCGCAGCGCATCCTGCTGTCGGCCGAGGACGCGCAAGCCGCCGTGCGCGCCAGCCTGGCCAATGACCACGTGCGGCTTTACAAGGCGCTGGGCGGAGGATGGGAACACCCTCCTGAGGCGCCCACGGCAACCGCCCCCACCGAGCTGCCGGCCCGCCCGGCTTTCCTGGCCCTGTCAACTTCCCTGCCGGCGCGCGCCGCGCAGGCGCCCTTGCCATGA
PROTEIN sequence
Length: 502
MNGRPVPRLALHFLTLSLTAALAGCANPGPAPELPVSAVPTQWSAGGAAQPQSQSPTELAAWWRRFGDAELSALIDDALAHNPGVRSALAALRQSRALADVAAAALAPSLDGSGSAQRSHSDGGGTYNNFGLGLDASWEPDLSGGLRAGARAAESDARAAQMSLGQVQVSLAAEVALAYVDLRDQQARLLIAQDNLATQDDTLQIARWRQQAGLVSMLDVEQAATLAEQTRAQLPLRQTAVAQARHRLAVLTGRPPGALTFTPAPVPLPPDDLVLAFPADTLRQRPDVRQSEAQLQAAWARVAQADAARYPSLRLSGTLGLQSLSTGSLLNGSSVVASMLAGLTQPIFDGGAIAGRLRAQQAALDQASANHHTSVLAALQEVEDALVALQGDRARIGSLQAAAVAARNAEQLARQQYQAGLIGFDVVLQAQRILLSAEDAQAAVRASLANDHVRLYKALGGGWEHPPEAPTATAPTELPARPAFLALSTSLPARAAQAPLP*