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scnpilot_expt_750_bf_scaffold_1545_8

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 6269..7615

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein id=12495449 bin=THIO_HI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 450.0
  • Bit_score: 856
  • Evalue 1.60e-245
  • rbh
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 445.0
  • Bit_score: 514
  • Evalue 2.50e-143
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABM38844.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 445.0
  • Bit_score: 514
  • Evalue 1.30e-142

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Taxonomy

Polaromonas naphthalenivorans → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1347
ATGAGCGACTCTTCCGCTGCCACCCCTCCCGCCCCACCGGCGGCATCCACGCCCGCGTCGGGCATCGACCATCTGCTGGGCGACGACCGTCCGCCGGTCTGGTGGCGCCGGCCGACGCTGTGGCTCGGGCTGGCGCTGCTGGTCGCGGCCGGCGCCGGCCTGTGGTGGTGGCAGGGTCGGCAGGCGCAGCGCGCGGCACCGGTCTACGTCACGACGCCCATCGAGCGCGGCGACATCACGCTCAGCGTGACGGCCAACGGCACGCTGAATCCGACCCGCTCGGTCGCCATCGGCAGCGAGCTGTCGGGCACCGTGGCGCGCGTGCTGGTCGACGTCAACGACCGGGTCAAGCGGGGCCAGGTGCTGGTCGAGCTGGACCGCACCAAGTTCGAGGACACGGTGAACCGCTCGCGTGCCGCGCTGGTGGCGGCGCAGGCGGCGCTGGTGCAAAACGAGGCCACGGCGCGCGAGGCACGCGCCACGCTCGAACGCTTTGAAGAAGTGGCGCGCCTGTCGGCCGGCCGCGTGCCGTCGGCGACCGAGCTCGACACCGCCCGCGCCACGCTGGCGCGCGCCAACGCCAGTACCGACAACGCGCGCGCGCTGGTCGCGCAGGCGCGCGCCACGCTGTCGACCGACGAGACCAACCTGTCGAAGGCCTCGATCCGCTCGCCGATCGACGGCGTGGTGCTGGCGCGCTCGGTCGACCCCGGCAACGCGGTGGCCGCCTCGCTGCAGGCGGTGACGCTGTTCACGCTGGGCGAAGACCTGACGCGGCTGATCATGGAAGCCGACGTGGACGAGGCCGACGTCGGCGCGGTGCAGCAGGGCCAGCGCGCCAGCTTCACCGTCAGCGCCTACCCGGCACGCCACTATCCGGCGCAGGTCACCCGCGTGGCCTATGGCTCGACCACCACCAACAACGTCGTCACCTACACCACCCAGCTCAGCGTCGACAACGCCGACCTCAGCCTGCGCCCCGGCATGACGGCCACCGCCACCATCGTCTCGACCGAGCGCCAAGGCGTGCTGCTGGTGCCCAACACGGCGCTGCGCTTCACGCCGACCAGCGCCCAGCCGGTCCAGCCTGCTGGCGCGGCGCCCGGTGGCAGAGGCAACCTGGTGTCGAGCATGATGGCGCGCCCGCCAGCCGCCCCGCGCCGCCCGCGCGAGGCCGGCGTCCCAGCGGCGGCCGACCAGCAGCGCCAGATCTGGACCCTGCAGGGCCAGCAGCCGGTGGCCGTCAGCGTGCGCACCGGCATCAGCGACGGGCGCCGCACCGAGGTCAGCAGCCCCGAGTTGCAGCCCGGCACGCCGGTCATCACCGACCAGAGAGCGGCGCAGTGA
PROTEIN sequence
Length: 449
MSDSSAATPPAPPAASTPASGIDHLLGDDRPPVWWRRPTLWLGLALLVAAGAGLWWWQGRQAQRAAPVYVTTPIERGDITLSVTANGTLNPTRSVAIGSELSGTVARVLVDVNDRVKRGQVLVELDRTKFEDTVNRSRAALVAAQAALVQNEATAREARATLERFEEVARLSAGRVPSATELDTARATLARANASTDNARALVAQARATLSTDETNLSKASIRSPIDGVVLARSVDPGNAVAASLQAVTLFTLGEDLTRLIMEADVDEADVGAVQQGQRASFTVSAYPARHYPAQVTRVAYGSTTTNNVVTYTTQLSVDNADLSLRPGMTATATIVSTERQGVLLVPNTALRFTPTSAQPVQPAGAAPGGRGNLVSSMMARPPAAPRRPREAGVPAAADQQRQIWTLQGQQPVAVSVRTGISDGRRTEVSSPELQPGTPVITDQRAAQ*