ggKbase home page

scnpilot_expt_750_bf_scaffold_1539_18

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(15564..16469)

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter ATPase; K09695 lipooligosaccharide transport system ATP-binding protein id=12494177 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 302.0
  • Bit_score: 598
  • Evalue 4.20e-168
  • rbh
ABC-2 type transporter ATPase similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 301.0
  • Bit_score: 529
  • Evalue 8.70e-148
ABC-2 type transporter ATPase {ECO:0000313|EMBL:AAZ96230.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 301.0
  • Bit_score: 529
  • Evalue 4.30e-147

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGCTGAAAGTGCGCGGCCTGACGAAACGATACGGCGCTACCGAGGTCGTGCGGAACCTCGACCTGACCGTGCAGCGCGGCGAATGCTTCGGCCTCCTCGGTCCCAATGGCGCGGGCAAGACCACCACGCTGCGTCTGCTGCTCGGCCTGATCGAGCCCGATGCCGGCAGCATCGAACTGGCCGGCATCGCGGTGCCGCAATGCGCGCGCGAGGCCCGCATGAAAATCGGCGTGGTGCCGCAGATGGACAACCTCGACCCGGATTTCTCCGTGCGCGAGAACCTGCTCGCCTACGGCCGCTATTTCGGCATGAGCAAGGCCGCCATCACGGCGCGGGTGCCGGAATTGCTGGATTTCGCCGGACTCGCCAGCAAGGCCGACGCGCGGATCGTCCAGTTGTCGGGCGGCATGAAGCGTCGGCTCACACTGGCGCGTGCCCTGGTGCACGATCCGGATATCCTCTTCCTCGACGAACCGACCACCGGGCTGGACCCGCAGGCGCGCCACCTCATCTGGCAGGGCCTGCGGCGCCTGACAGGCGCAGGCAAGACCATCGTGCTGACCACCCACTTCATGGACGAGGCCGAACGGCTGGCCGACCGGCTGGCCATCCTCGATCACGGCCGTGTCGTCGCCGAAGGCGCGCCGCGCGCCCTGATCGAATCGCATATCGAACCGGCCGTGGTCGAAGTGTTCGGCGAAGGACTGGCCGACTGGACGCATGCGCACGCGGCCGCCCTGTGCCAGCGTTTCGAAACCGTCGGCGAGACCCTGTTCTGCTATACCGACAGCCCCGACACCGTCATCGGCGTGCTGAAGCAGACGCCCGCGCTGCGCTACCTGCACCGGCCGTCGAACCTGGAAGACGTGTTCCTCAAGCTGACCGGACGCGACCTGCGGGATTAA
PROTEIN sequence
Length: 302
MLKVRGLTKRYGATEVVRNLDLTVQRGECFGLLGPNGAGKTTTLRLLLGLIEPDAGSIELAGIAVPQCAREARMKIGVVPQMDNLDPDFSVRENLLAYGRYFGMSKAAITARVPELLDFAGLASKADARIVQLSGGMKRRLTLARALVHDPDILFLDEPTTGLDPQARHLIWQGLRRLTGAGKTIVLTTHFMDEAERLADRLAILDHGRVVAEGAPRALIESHIEPAVVEVFGEGLADWTHAHAAALCQRFETVGETLFCYTDSPDTVIGVLKQTPALRYLHRPSNLEDVFLKLTGRDLRD*