ggKbase home page

scnpilot_expt_750_bf_scaffold_2724_8

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 6139..6750

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25 id=12494779 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 204.0
  • Bit_score: 409
  • Evalue 1.80e-111
  • rbh
50S ribosomal protein L25 similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 203.0
  • Bit_score: 352
  • Evalue 9.90e-95
50S ribosomal protein L25 {ECO:0000255|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000255|HAMAP-Rule:MF_01334}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogeno similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 203.0
  • Bit_score: 352
  • Evalue 4.90e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGGAAATCGAAGTGATTGCCGCCAGGCGTGAACTGCAAGGTACGGGTGCGAGCCGCCGTCTGCGTCATGCCGGCAAAGTCCCGGGTATCGTCTACGGCGGCCCGACCGCCCCGGTGCAGATCGAACTGGACCACAATGCGCTGTACCATGCGCTGCGCAAGGAAGCCTTCCATTCTTCCGTGCTGGCGCTGAAAATCGACGGCGCCAGGGAATCCGTGCTGCTGCGTGACACGCAATGGCATCCCTACAAGCAGCAGGTCCTGCACGTCGACTTCCAGCGCGTCGACAAGAATCAGAAGATCCACGTCAAGGTGCCGCTGCACTTCCTCAATGCCGACGTGGCGCCGGGGGTCAAGACCGGCGGCGGCAAGCCGCATCACATCATGACCGAACTCGACGTGGAGTGCCTGCCCGGCAGCCTGCCCGGATTCATCGAGATCGACATGGGCCAGCTCGAAGTCGGCCACTCGATTCATGCGAACGATCTGAAGCTGCCCCAGGGCGTCGAACTGGTCGCACACGTCAAGCAGGAAAACCCTGCCGTGGCTTCGATCAATGCACCCAAGGGCGGTGCGGCTGAAGAAGTGCCGGCTGCCGCGCCGGAGGCCTGA
PROTEIN sequence
Length: 204
MEIEVIAARRELQGTGASRRLRHAGKVPGIVYGGPTAPVQIELDHNALYHALRKEAFHSSVLALKIDGARESVLLRDTQWHPYKQQVLHVDFQRVDKNQKIHVKVPLHFLNADVAPGVKTGGGKPHHIMTELDVECLPGSLPGFIEIDMGQLEVGHSIHANDLKLPQGVELVAHVKQENPAVASINAPKGGAAEEVPAAAPEA*