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scnpilot_expt_750_bf_scaffold_103

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Displaying items 1-30 of 347 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_103_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..387)
DNA (387bp) protein (129aa)
Transcriptional regulator, AsnC family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYK6_VARPE
Variovorax paradoxus strain MEDvA23 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28784.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
AsnC family transcriptional regulator
scnpilot_expt_750_bf_scaffold_103_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

473..1660
DNA (1188bp) protein (396aa)
amidohydrolase (EC:3.5.1.32)
Amidohydrolase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYK5_VARPE rbh
Variovorax paradoxus strain MEDvA23 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28785.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
scnpilot_expt_750_bf_scaffold_103_3
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1666..2895
DNA (1230bp) protein (410aa)
Diaminopropionate ammonia-lyase family n=1 Tax=Acidovorax sp. CF316 RepID=J0KIW0_9BURK rbh
Diaminopropionate ammonia-lyase family {ECO:0000313|EMBL:EJE51138.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
diaminopropionate ammonia-lyase
scnpilot_expt_750_bf_scaffold_103_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2989..3618
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2JQX8_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL70215.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
putative transmembrane protein
scnpilot_expt_750_bf_scaffold_103_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3622..4833)
DNA (1212bp) protein (404aa)
Patatin n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYK3_VARPE rbh
Variovorax paradoxus strain MEDvA23 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28787.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
patatin
scnpilot_expt_750_bf_scaffold_103_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4910..6001
DNA (1092bp) protein (364aa)
ATPase involved in chromosome partitioning n=1 Tax=Variovorax sp. CF313 RepID=J2K5Z9_9BURK rbh
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:EJL68643.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
ATPase-like protein, ParA/MinD family
scnpilot_expt_750_bf_scaffold_103_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6004..6951
DNA (948bp) protein (316aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2SSV2_9BURK rbh
Variovorax paradoxus strain MEDvA23 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28789.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
LysR family transcriptional regulator rbh
scnpilot_expt_750_bf_scaffold_103_8
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7079..8776
DNA (1698bp) protein (566aa)
Nitrate/nitrite transporter n=1 Tax=Variovorax sp. CF313 RepID=J3CCF0_9BURK rbh
Nitrate/nitrite transporter {ECO:0000313|EMBL:EJL68641.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF
major facilitator superfamily protein
scnpilot_expt_750_bf_scaffold_103_9
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8793..9371)
DNA (579bp) protein (193aa)
Putative molybdopterin-dependent oxidoreductase n=1 Tax=Acidovorax sp. CF316 RepID=J0KNE9_9BURK
Putative molybdopterin-dependent oxidoreductase {ECO:0000313|EMBL:EJE52728.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
hypothetical protein
scnpilot_expt_750_bf_scaffold_103_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9484..9831
DNA (348bp) protein (116aa)
ModE family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003711884
Molybdenum-binding protein {ECO:0000313|EMBL:EJL68640.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF3
ModE family transcriptional regulator
scnpilot_expt_750_bf_scaffold_103_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9828..10325
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037B5942
Variovorax paradoxus strain MEDvA23 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28792.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
scnpilot_expt_750_bf_scaffold_103_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10286..10957)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037B1773 rbh
nitroreductase
Nitroreductase {ECO:0000313|EMBL:EFI58936.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
scnpilot_expt_750_bf_scaffold_103_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10963..11139)
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000380EE93
Variovorax paradoxus strain MEDvA23 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28793.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
scnpilot_expt_750_bf_scaffold_103_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11313..11996
DNA (684bp) protein (228aa)
Molybdate ABC transporter, inner membrane subunit n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYJ7_VARPE rbh
Variovorax paradoxus strain MEDvA23 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28794.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
molybdate ABC transporter inner membrane subunit
scnpilot_expt_750_bf_scaffold_103_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12041..12790
DNA (750bp) protein (250aa)
Molybdenum ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Variovorax sp. CF313 RepID=J2K5Z3_9BURK rbh
Molybdenum ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EJL68638.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
molybdenum ABC transporter periplasmic molybdate-binding protein
scnpilot_expt_750_bf_scaffold_103_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12787..13575
DNA (789bp) protein (263aa)
ABC-type sulfate/molybdate transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2K294_9BURK rbh
ABC-type sulfate/molybdate transport system, ATPase component {ECO:0000313|EMBL:EJL67408.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vario
ABC transporter
scnpilot_expt_750_bf_scaffold_103_17
Variovorax sp. DB1, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13610..13891
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Variovorax sp. DB1 RepID=I3RYG7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AFK33054.1}; TaxID=1179817 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. DB1.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_103_18
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13888..14202
DNA (315bp) protein (105aa)
Plasmid stabilization system protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPR5_9BURK
Plasmid stabilization protein {ECO:0000313|EMBL:KGH01938.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testostero
plasmid stabilization system protein
scnpilot_expt_750_bf_scaffold_103_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14326..16674
DNA (2349bp) protein (783aa)
Anaerobic dehydrogenase, typically selenocysteine-containing n=1 Tax=Variovorax sp. CF313 RepID=J3CA46_9BURK rbh
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:EJL67409.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
oxidoreductase alpha (molybdopterin) subunit
scnpilot_expt_750_bf_scaffold_103_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16671..16961
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2JHK7_9BURK
Variovorax paradoxus strain MEDvA23 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28798.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
scnpilot_expt_750_bf_scaffold_103_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16969..17862
DNA (894bp) protein (298aa)
Formate dehydrogenase family accessory protein FdhD n=1 Tax=Variovorax sp. CF313 RepID=J3CA84_9BURK rbh
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.
formate dehydrogenase family accessory protein fdhd
scnpilot_expt_750_bf_scaffold_103_22
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18206..19051
DNA (846bp) protein (282aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP37744.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacter
scnpilot_expt_750_bf_scaffold_103_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19161..20210)
DNA (1050bp) protein (350aa)
tRNA 2-selenouridine synthase {ECO:0000256|SAAS:SAAS00035454}; EC=2.9.1.- {ECO:0000256|SAAS:SAAS00035457};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
tRNA 2-selenouridine synthase n=1 Tax=Variovorax sp. CF313 PF0_9BURK">RepID=J2SPF0_9BURK rbh
tRNA 2-selenouridine synthase
scnpilot_expt_750_bf_scaffold_103_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20235..21044)
DNA (810bp) protein (270aa)
phosphonate ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000360F0D2 rbh
Phosphonate ABC transporter, permease protein PhnE {ECO:0000313|EMBL:EJL67413.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
phosphonate ABC transporter inner membrane subunit rbh
scnpilot_expt_750_bf_scaffold_103_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21041..21880)
DNA (840bp) protein (280aa)
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00036ED134 rbh
binding-protein-dependent transport systems inner membrane component rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU38891.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
scnpilot_expt_750_bf_scaffold_103_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21877..22689)
DNA (813bp) protein (271aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
phosphonate ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI00035C7187 rbh
ABC transporter
scnpilot_expt_750_bf_scaffold_103_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22700..23560)
DNA (861bp) protein (287aa)
phosphonate ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003807BEC rbh
phosphonate ABC transporter periplasmic phosphonate-binding protein
Phosphonate ABC transporter, periplasmic phosphonate-binding protein {ECO:0000313|EMBL:ADU38889.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
scnpilot_expt_750_bf_scaffold_103_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23650..24702
DNA (1053bp) protein (351aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:000
segregation protein A n=1 Tax=Variovorax paradoxus RepID=UPI00036F2DD4 rbh
selenide, water dikinase
scnpilot_expt_750_bf_scaffold_103_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24831..26738)
DNA (1908bp) protein (636aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000364260D rbh
Variovorax paradoxus strain MEDvA23 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28804.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
Selenocysteine-specific translation elongation factor
scnpilot_expt_750_bf_scaffold_103_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26752..27954)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037F8FD5 rbh
Variovorax paradoxus strain MEDvA23 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28805.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
Displaying items 1-30 of 347 in total

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