name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_expt_750_bf_scaffold_132_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..522
|
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Variovorax sp. CF313 RepID=J3CCP6_9BURK
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJL68964.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
diguanylate cyclase/phosphodiesterase
|
|
scnpilot_expt_750_bf_scaffold_132_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(559..1785)
|
Peptidase, ArgE/DapE family n=1 Tax=Variovorax paradoxus B4 RepID=T1XDY7_VARPD
rbh
peptidase, ArgE/DapE family
rbh
Peptidase, ArgE/DapE family {ECO:0000313|EMBL:AGU51132.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parado
|
|
scnpilot_expt_750_bf_scaffold_132_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1803..3581)
|
amidase, hydantoinase/carbamoylase family (EC:3.5.1.87)
Amidase, hydantoinase/carbamoylase family n=1 Tax=Variovorax sp. CF313 RepID=J2STP9_9BURK
rbh
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:EJL68962.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
|
|
scnpilot_expt_750_bf_scaffold_132_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3578..4540)
|
allantoinase n=1 Tax=Variovorax paradoxus RepID=UPI0003706AF0
rbh
Putative urate catabolism protein {ECO:0000313|EMBL:EJL68961.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
putative xylanase/chitin deacetylase
|
|
scnpilot_expt_750_bf_scaffold_132_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4548..5222)
|
GntR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00035CEB96
rbh
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACS20540.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
|
|
scnpilot_expt_750_bf_scaffold_132_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5297..5647
|
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
hydroxyisourate hydrolase (EC:3.5.2.17)
5-hydroxyisourate hydrolase n=1 Tax=Variovorax sp. CF313 RepID=J3CCP3_9BURK
|
|
scnpilot_expt_750_bf_scaffold_132_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5652..6149)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000380CFE5
rbh
Variovorax paradoxus strain MEDvA23 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34752.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
|
|
scnpilot_expt_750_bf_scaffold_132_8
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6206..7015
|
Xanthine dehydrogenase accessory protein XdhC n=1 Tax=Variovorax sp. CF313 RepID=J2KC65_9BURK
rbh
Xanthine dehydrogenase accessory protein XdhC {ECO:0000313|EMBL:EJL77825.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=
xanthine dehydrogenase accessory protein xdhc
rbh
|
|
scnpilot_expt_750_bf_scaffold_132_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7231..8442
|
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00037D249F
rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EJL77824.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
|
|
scnpilot_expt_750_bf_scaffold_132_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8518..9858
|
hydroxypyruvate reductase (EC:1.1.1.81)
Putative glycerate kinase n=1 Tax=Variovorax sp. CF313 RepID=J2KXS5_9BURK
rbh
Putative glycerate kinase {ECO:0000313|EMBL:EJL77823.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
|
|
scnpilot_expt_750_bf_scaffold_132_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10021..11463
|
NAD-dependent aldehyde dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J3CTC9_9BURK
rbh
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EJL77821.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovor
aldehyde dehydrogenase
rbh
|
|
scnpilot_expt_750_bf_scaffold_132_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11479..12195)
|
Putative membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J2KC60_9BURK
rbh
Putative membrane protein {ECO:0000313|EMBL:EJL77820.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
mgtc/sapb transporter
|
|
scnpilot_expt_750_bf_scaffold_132_13
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12233..12808)
|
NLI interacting domain protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JVZ2_STEMA
Phosphoprotein phosphatase {ECO:0000313|EMBL:EYR68333.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter caps
NLI interacting domain-containing protein
|
|
scnpilot_expt_750_bf_scaffold_132_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12893..15658)
|
magnesium-transporting ATPase n=1 Tax=Variovorax paradoxus RepID=UPI00036DF68F
rbh
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:EJL77819.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
magnesium-translocating p-type ATPase
|
|
scnpilot_expt_750_bf_scaffold_132_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15866..16069)
|
Uncharacterized protein {ECO:0000313|EMBL:AGU51119.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
|
|
scnpilot_expt_750_bf_scaffold_132_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16462..16941
|
Protein tyrosine phosphatase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVA2_VARPE
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ADU38696.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parado
|
|
scnpilot_expt_750_bf_scaffold_132_17
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16945..18786)
|
phoD; alkaline phosphatase (EC:3.1.4.1)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037D205A
rbh
Alkaline phosphatase {ECO:0000313|EMBL:KDB54111.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM
|
|
scnpilot_expt_750_bf_scaffold_132_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18899..19327)
|
4-hydroxybenzoyL-CoA thioesterase (EC:3.1.2.23)
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:ADU38695.1}; EC=3.1.2.23 {ECO:0000313|EMBL:ADU38695.1};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Variovorax paradoxus RepID=UPI000369E4D4
|
|
scnpilot_expt_750_bf_scaffold_132_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19327..20628)
|
TRAP transporter, DctM subunit n=1 Tax=Variovorax sp. CF313 RepID=J3CTC6_9BURK
rbh
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EJL77816.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sou
TRAP dicarboxylate transporter subunit DctM
rbh
|
|
scnpilot_expt_750_bf_scaffold_132_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20625..21125)
|
C4-dicarboxylate ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00037FE8A3
rbh
TRAP dicarboxylate transporter subunit DctQ
rbh
TrapT family, DctQ subunit C4-dicarboxylate transport {ECO:0000313|EMBL:ACS20528.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
|
|
scnpilot_expt_750_bf_scaffold_132_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21206..22261)
|
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J3CSU9_9BURK
rbh
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EJL77814.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
TRAP dicarboxylate transporter subunit DctP
|
|
scnpilot_expt_750_bf_scaffold_132_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22299..23549)
|
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J2KXR5_9BURK
rbh
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase {ECO:0000313|EMBL:EJL77813.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
FMN-dependent alpha-hydroxy acid dehydrogenase
|
|
scnpilot_expt_750_bf_scaffold_132_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23567..24553)
|
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00037BC9EB
rbh
putative BUG-like extracytoplasmic solute binding receptor, TTT family
Putative BUG-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AGU51116.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
|
|
scnpilot_expt_750_bf_scaffold_132_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24596..26212)
|
indolepyruvate oxidoreductase n=1 Tax=Variovorax paradoxus RepID=UPI00037FD569
rbh
2-oxoacid:ferredoxin oxidoreductase, gamma subunit {ECO:0000313|EMBL:EJL77812.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
putative indolepyruvate ferredoxin oxidoreductase, subunit B
rbh
|
|
scnpilot_expt_750_bf_scaffold_132_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26227..28386)
|
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit n=1 Tax=Variovorax sp. CF313 RepID=J3CTC3_9BURK
rbh
Variovorax paradoxus strain MEDvA23 contig_110, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ19094.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
|
|
scnpilot_expt_750_bf_scaffold_132_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28464..29378
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2KC50_9BURK
rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL77810.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
LysR family transcriptional regulator
|
|
scnpilot_expt_750_bf_scaffold_132_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29430..30683
|
iron transporter n=1 Tax=Variovorax paradoxus RepID=UPI000360EF57
rbh
Mn2+/Fe2 transporter, NRAMP family {ECO:0000313|EMBL:EJL77809.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
natural resistance-associated macrophage protein
|
|
scnpilot_expt_750_bf_scaffold_132_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30736..31485
|
Putative integral membrane protein, TauE family n=1 Tax=Variovorax paradoxus B4 RepID=T1XKC7_VARPD
rbh
putative integral membrane protein, TauE family
Putative integral membrane protein, TauE family {ECO:0000313|EMBL:AGU52754.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sourc
|
|
scnpilot_expt_750_bf_scaffold_132_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31660..33306
|
FAD-binding molybdopterin dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00038112C8
rbh
Variovorax paradoxus strain MEDvA23 contig_110, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ19107.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
xanthine dehydrogenase, small subunit
rbh
|
|
scnpilot_expt_750_bf_scaffold_132_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33311..35779
|
xanthine dehydrogenase, molybdopterin binding subunit (EC:1.17.1.4)
rbh
Xanthine dehydrogenase, molybdopterin binding subunit {ECO:0000313|EMBL:ADU38680.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ADU38680.1};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
Xanthine dehydrogenase, molybdopterin binding subunit n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UV86_VARPE
rbh
|