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scnpilot_expt_750_bf_scaffold_161

Search features with annotation key words

Displaying items 1-30 of 209 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_161_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85..687
DNA (603bp) protein (201aa)
Putative phosphohydrolase n=1 Tax=Variovorax sp. CF313 RepID=J2KLZ3_9BURK
Putative phosphohydrolase {ECO:0000313|EMBL:EJL74098.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
metallophosphoesterase
scnpilot_expt_750_bf_scaffold_161_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1241..1867)
DNA (627bp) protein (209aa)
hypothetical protein
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35397.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
id=4023762 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
scnpilot_expt_750_bf_scaffold_161_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1871..2893)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL15 RepID=U8HY31_PSEAI
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35396.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
scnpilot_expt_750_bf_scaffold_161_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3297..3941
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QVN4_9ZZZZ
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35395.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
scnpilot_expt_750_bf_scaffold_161_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4079..5122
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IFN2_ANADE
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35394.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
beta family protein
scnpilot_expt_750_bf_scaffold_161_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5232..5534
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q7WXG8_CUPNH
Uncharacterized protein {ECO:0000313|EMBL:EZQ20232.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzan
hypothetical protein
scnpilot_expt_750_bf_scaffold_161_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5574..6074)
DNA (501bp) protein (167aa)
Putative copper-binding protein n=1 Tax=Variovorax sp. CF313 RepID=J2KIJ2_9BURK rbh
Putative copper-binding protein {ECO:0000313|EMBL:EJL80010.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
blue (type1) copper domain-containing protein
scnpilot_expt_750_bf_scaffold_161_8
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6134..6877)
DNA (744bp) protein (248aa)
ABC transporter-related protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWS6_LEPCP rbh
ABC transporter-like protein
ABC transporter-related protein {ECO:0000313|EMBL:ACB36275.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain A
scnpilot_expt_750_bf_scaffold_161_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6878..7567)
DNA (690bp) protein (230aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Variovorax sp. CF313 RepID=J2TMZ2_9BURK rbh
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EJL80012.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
polar amino acid ABC transporter, inner membrane subunit
scnpilot_expt_750_bf_scaffold_161_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7567..8304)
DNA (738bp) protein (246aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Variovorax sp. CF313 RepID=J2L447_9BURK rbh
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EJL80013.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobac
polar amino acid ABC transporter, inner membrane subunit
scnpilot_expt_750_bf_scaffold_161_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8362..9288)
DNA (927bp) protein (309aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Variovorax sp. CF313 RepID=J3CWN9_9BURK rbh
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJL80014.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteri
extracellular solute-binding protein family 3
scnpilot_expt_750_bf_scaffold_161_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9311..10480)
DNA (1170bp) protein (390aa)
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Variovorax sp. CF313 RepID=J2KIM1_9BURK rbh
Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:EJL80015.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
cystathionine beta-lyase
scnpilot_expt_750_bf_scaffold_161_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10514..10966)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CX43_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80016.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
scnpilot_expt_750_bf_scaffold_161_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11063..12001
DNA (939bp) protein (313aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2TN17_9BURK rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL80017.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
LysR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_161_15
unknown

Not on your lists

comp(12012..12230)
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_161_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12275..14710)
DNA (2436bp) protein (812aa)
Copper-transporting P-type ATPase {ECO:0000313|EMBL:AGU47886.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AGU47886.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
copper-transporting P-type ATPase (EC:3.6.3.4)
Copper-transporting P-type ATPase n=1 Tax=Variovorax paradoxus B4 RepID=T1X601_VARPD rbh
scnpilot_expt_750_bf_scaffold_161_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14826..15017)
DNA (192bp) protein (64aa)
Copper chaperone n=1 Tax=Variovorax sp. CF313 RepID=J2L475_9BURK
Copper chaperone {ECO:0000313|EMBL:EJL80018.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora
heavy metal transport/detoxification protein
scnpilot_expt_750_bf_scaffold_161_18
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15117..17132)
DNA (2016bp) protein (672aa)
UPI0003D069E4 related cluster n=1 Tax=unknown RepID=UPI0003D069E4 rbh
Multicopper oxidase {ECO:0000313|EMBL:ESZ20136.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48
multicopper oxidase domain-containing protein
scnpilot_expt_750_bf_scaffold_161_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17317..17523)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CWQ3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80019.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
scnpilot_expt_750_bf_scaffold_161_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17568..18227)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WTY7_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD41525.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
putative cytochrome c
scnpilot_expt_750_bf_scaffold_161_21
unknown

Not on your lists

comp(18288..18704)
DNA (417bp) protein (139aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_161_22
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18763..19575)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003665E75
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_161_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19625..19999)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CX45_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80021.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
scnpilot_expt_750_bf_scaffold_161_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20075..20566)
DNA (492bp) protein (164aa)
Putative copper-binding protein n=1 Tax=Variovorax sp. CF313 RepID=J2TN28_9BURK rbh
Putative copper-binding protein {ECO:0000313|EMBL:EJL80022.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
putative copper-binding protein
scnpilot_expt_750_bf_scaffold_161_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20613..22028)
DNA (1416bp) protein (472aa)
Putative multicopper oxidase n=1 Tax=Variovorax sp. CF313 RepID=J2L493_9BURK rbh
Putative multicopper oxidase {ECO:0000313|EMBL:EJL80023.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sourc
multicopper oxidase
scnpilot_expt_750_bf_scaffold_161_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22064..23488)
DNA (1425bp) protein (475aa)
Outer membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J3CWQ6_9BURK rbh
Outer membrane protein {ECO:0000313|EMBL:EJL80024.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
putative copper resistance-like lipoprotein rbh
scnpilot_expt_750_bf_scaffold_161_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23485..23856)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KIN9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80025.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
scnpilot_expt_750_bf_scaffold_161_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23973..24398)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CX48_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80026.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
scnpilot_expt_750_bf_scaffold_161_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24466..24861)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TN32_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80027.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
scnpilot_expt_750_bf_scaffold_161_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25053..25736
DNA (684bp) protein (228aa)
Heavy metal response regulator n=1 Tax=Variovorax sp. CF313 RepID=J2L499_9BURK rbh
Heavy metal response regulator {ECO:0000313|EMBL:EJL80028.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp.
winged helix family two component heavy metal response transcriptional regulator
Displaying items 1-30 of 209 in total

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