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scnpilot_expt_750_bf_scaffold_251

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_251_1
unknown

Not on your lists

comp(949..1299)
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_251_2
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1433..1933)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RWA3_9BURK
XRE family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EFV95278.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis A
scnpilot_expt_750_bf_scaffold_251_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2073..2906)
DNA (834bp) protein (278aa)
Putative metallophosphoesterase n=1 Tax=Variovorax paradoxus B4 RepID=T1X4F9_VARPD rbh
putative metallophosphoesterase
Putative metallophosphoesterase {ECO:0000313|EMBL:AGU47787.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax pa
scnpilot_expt_750_bf_scaffold_251_4
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5314..5571
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KGE86286.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylib
scnpilot_expt_750_bf_scaffold_251_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6370..6720)
DNA (351bp) protein (117aa)
Putative transposase n=1 Tax=Variovorax paradoxus B4 RepID=T1XNE8_VARPD
putative transposase
Putative transposase {ECO:0000313|EMBL:AGU53824.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.
scnpilot_expt_750_bf_scaffold_251_6
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7256..8629
DNA (1374bp) protein (458aa)
hypothetical protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR13_PUSST rbh
hypothetical protein
scnpilot_expt_750_bf_scaffold_251_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8705..9043
DNA (339bp) protein (113aa)
cytochrome C n=1 Tax=Variovorax paradoxus RepID=UPI0003763DC9
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ACS22942.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
scnpilot_expt_750_bf_scaffold_251_8
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9552..10955
DNA (1404bp) protein (468aa)
Mg chelatase-related protein n=1 Tax=Variovorax sp. CF313 RepID=J3CQT9_9BURK rbh
Mg chelatase-related protein {ECO:0000313|EMBL:EJL76644.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sourc
mg chelatase subunit chli
scnpilot_expt_750_bf_scaffold_251_9
unknown

Not on your lists

11063..11344
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037E0EBD
scnpilot_expt_750_bf_scaffold_251_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11759..13672)
DNA (1914bp) protein (638aa)
Protein kinase family protein n=1 Tax=Variovorax sp. CF313 RepID=J2K8S6_9BURK rbh
Protein kinase family protein {ECO:0000313|EMBL:EJL76645.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp.
serine/threonine protein kinase
scnpilot_expt_750_bf_scaffold_251_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13704..14417)
DNA (714bp) protein (238aa)
Type VI secretion-associated protein, BMA_A0400 family n=1 Tax=Variovorax sp. CF313 RepID=J3CRA8_9BURK rbh
Type VI secretion-associated protein, BMA_A0400 family {ECO:0000313|EMBL:EJL76646.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;
type VI secretioN-associated protein
scnpilot_expt_750_bf_scaffold_251_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14419..18078)
DNA (3660bp) protein (1220aa)
Type VI secretion protein IcmF n=1 Tax=Variovorax sp. CF313 RepID=J2TED2_9BURK rbh
Type VI secretion protein IcmF {ECO:0000313|EMBL:EJL76647.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sou
type VI secretion protein icmf rbh
scnpilot_expt_750_bf_scaffold_251_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18078..19448)
DNA (1371bp) protein (457aa)
Type VI secretion system OmpA/MotB family protein n=1 Tax=Variovorax sp. CF313 RepID=J2KUG6_9BURK rbh
Type VI secretion system OmpA/MotB family protein {ECO:0000313|EMBL:EJL76648.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sou
hypothetical protein
scnpilot_expt_750_bf_scaffold_251_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19457..20833)
DNA (1377bp) protein (459aa)
Type VI secretion protein, VC_A0114 family n=1 Tax=Variovorax sp. CF313 RepID=J3CQU2_9BURK rbh
Variovorax paradoxus strain MEDvA23 contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36966.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
type VI secretion protein rbh
scnpilot_expt_750_bf_scaffold_251_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21000..21515)
DNA (516bp) protein (172aa)
type VI secretion protein n=1 Tax=Variovorax paradoxus RepID=UPI00037AA0F5 rbh
type VI secretion lipoprotein, VC_A0113 family
Type VI secretion lipoprotein, VC_A0113 family {ECO:0000313|EMBL:AGU47375.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source
scnpilot_expt_750_bf_scaffold_251_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21645..22055
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X4V4_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU47374.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
scnpilot_expt_750_bf_scaffold_251_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22120..24006
DNA (1887bp) protein (629aa)
Type VI secretion system FHA domain protein n=1 Tax=Variovorax sp. CF313 RepID=J2TED7_9BURK rbh
Type VI secretion system FHA domain protein {ECO:0000313|EMBL:EJL76652.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vari
FHA domain containing protein rbh
scnpilot_expt_750_bf_scaffold_251_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23999..24820
DNA (822bp) protein (274aa)
serine/threonine phosphatase n=1 Tax=Variovorax paradoxus RepID=UPI00036ACBD9 rbh
putative serine/threonine phosphatase
Putative serine/threonine phosphatase {ECO:0000313|EMBL:AGU47372.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
scnpilot_expt_750_bf_scaffold_251_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24843..25223)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X4J9_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU47371.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
scnpilot_expt_750_bf_scaffold_251_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25241..25906)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CUW2_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS20398.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
scnpilot_expt_750_bf_scaffold_251_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25942..27012)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000370DFC9 rbh
pentapeptide repeat-containing protein
Pentapeptide repeat protein {ECO:0000313|EMBL:ACS20397.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradox
scnpilot_expt_750_bf_scaffold_251_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27009..29612)
DNA (2604bp) protein (868aa)
Pentapeptide repeat protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CUW0_VARPS rbh
pentapeptide repeat-containing protein rbh
Pentapeptide repeat protein {ECO:0000313|EMBL:ACS20396.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradox
scnpilot_expt_750_bf_scaffold_251_23
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29609..30004)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HRS4_ACHXA
Uncharacterized protein {ECO:0000313|EMBL:EYR68261.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
scnpilot_expt_750_bf_scaffold_251_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30012..32378)
DNA (2367bp) protein (789aa)
Type VI secretion system Vgr family protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CX60_VARPS rbh
type VI secretion system Vgr family protein rbh
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:ACS16864.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
scnpilot_expt_750_bf_scaffold_251_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32411..35131)
DNA (2721bp) protein (907aa)
Type VI secretion ATPase, ClpV1 family n=1 Tax=Variovorax sp. CF313 RepID=J2K8U0_9BURK rbh
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:EJL76660.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovora
type VI secretion ATPase, clpv1 family rbh
scnpilot_expt_750_bf_scaffold_251_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35128..36303)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003806101 rbh
Type VI secretion protein, VC_A0111 family {ECO:0000313|EMBL:EJL76661.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vario
type VI secretion protein rbh
scnpilot_expt_750_bf_scaffold_251_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36300..38171)
DNA (1872bp) protein (624aa)
Type VI secretion protein, VC_A0110 family n=1 Tax=Variovorax sp. CF313 RepID=J2TEE5_9BURK rbh
Type VI secretion protein, VC_A0110 family {ECO:0000313|EMBL:EJL76662.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
type VI secretion protein
scnpilot_expt_750_bf_scaffold_251_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38172..38720)
DNA (549bp) protein (183aa)
Type VI secretion system lysozyme-related protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CX56_VARPS rbh
type VI secretion system lysozyme-like protein rbh
Type VI secretion system lysozyme-related protein {ECO:0000313|EMBL:ACS16860.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sour
scnpilot_expt_750_bf_scaffold_251_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38717..39580)
DNA (864bp) protein (288aa)
Protein of avirulence locus involved in temperature-dependent protein secretion n=1 Tax=Variovorax sp. CF313 RepID=J3CQU9_9BURK rbh
Protein of avirulence locus involved in temperature-dependent protein secretion {ECO:0000313|EMBL:EJL76664.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Com
ImpE domain-containing protein rbh
scnpilot_expt_750_bf_scaffold_251_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39677..40159)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000371C227
Hemolysin-coregulated protein (Uncharacterized) {ECO:0000313|EMBL:EJL76665.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sourc
hypothetical protein
Displaying items 1-30 of 84 in total

View Taxonomy