name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_expt_750_bf_scaffold_412_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..85)
|
NAD(P)(+) transhydrogenase (AB-specific) {ECO:0000313|EMBL:ACS22611.1}; EC=1.6.1.2 {ECO:0000313|EMBL:ACS22611.1};; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
|
|
scnpilot_expt_750_bf_scaffold_412_2
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(237..1220)
|
Transcriptional regulator, AraC family n=12 Tax=pseudomallei group RepID=A1V8L1_BURMS
rbh
helix-turn-helix domain protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AIO87684.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;"
|
|
scnpilot_expt_750_bf_scaffold_412_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1381..2721)
|
Arabinose efflux permease family protein n=1 Tax=Variovorax sp. CF313 RepID=J2K3J9_9BURK
rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL67838.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vari
general substrate transporter
|
|
scnpilot_expt_750_bf_scaffold_412_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2806..3411)
|
methyltransferase (EC:2.1.1.-)
SAM-dependent methyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI0003770211
rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL67839.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
|
|
scnpilot_expt_750_bf_scaffold_412_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3429..4121)
|
Peroxiredoxin n=1 Tax=Variovorax sp. CF313 RepID=J2JIV8_9BURK
rbh
Peroxiredoxin {ECO:0000313|EMBL:EJL67840.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax s
putative alkyl hydroperoxide reductase/thiol-specific antioxidant
|
|
scnpilot_expt_750_bf_scaffold_412_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4219..6450)
|
protein-disulfide reductase (EC:1.8.1.8)
Thiol:disulfide interchange protein n=1 Tax=Variovorax sp. CF313 RepID=J3CAZ4_9BURK
rbh
Thiol:disulfide interchange protein {ECO:0000313|EMBL:EJL67841.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;
|
|
scnpilot_expt_750_bf_scaffold_412_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6494..7267)
|
Putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain containing protein n=1 Tax=Variovorax sp. CF313 RepID=J2SQM0_9BURK
rbh
Putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain containing protein {ECO:0000313|EMBL:EJL67842.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria;
alanyL-tRNA synthetase, class iic-like protein
|
|
scnpilot_expt_750_bf_scaffold_412_8
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7399..8772
|
Glucose/sorbosone dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J2K3K4_9BURK
rbh
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:EJL67843.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
L-sorbosone dehydrogenase
|
|
scnpilot_expt_750_bf_scaffold_412_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8789..9829)
|
LacI family transcription regulator n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RKT0_COMTE
rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KGH29070.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas te
LacI family transcriptional regulator
|
|
scnpilot_expt_750_bf_scaffold_412_10
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9978..11318
|
nucleobase:cation symporter n=1 Tax=Rhizobium meliloti RepID=UPI0002E1F9B0
rbh
Nucleobase:cation symporter {ECO:0000313|EMBL:KAK49318.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
xanthine/uracil/vitamin C permease
|
|
scnpilot_expt_750_bf_scaffold_412_11
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11371..12798
|
Uncharacterized protein n=1 Tax=Acinetobacter sp. CIP 64.2 RepID=N9N3A0_9GAMM
rbh
S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:EWY41787.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skerma
putative membrane protein
|
|
scnpilot_expt_750_bf_scaffold_412_12
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
12795..13508
|
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4F7I3_SACEN
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:CAM00007.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (
|
|
scnpilot_expt_750_bf_scaffold_412_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13500..14078)
|
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Variovorax sp. CF313 RepID=J3CAV0_9BURK
rbh
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:EJL67844.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
GCN5-like N-acetyltransferaser
|
|
scnpilot_expt_750_bf_scaffold_412_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14153..14578
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2JIW5_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL67845.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
winged helix DNA-binding domain protein
|
|
scnpilot_expt_750_bf_scaffold_412_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14584..16353
|
Chloride channel protein EriC n=1 Tax=Variovorax sp. CF313 RepID=J3CAZ6_9BURK
rbh
Chloride channel protein EriC {ECO:0000313|EMBL:EJL67846.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sour
Chloride channel core
rbh
|
|
scnpilot_expt_750_bf_scaffold_412_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16355..17365)
|
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Variovorax sp. CF313 RepID=J2SQM4_9BURK
rbh
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:EJL67847.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sou
zinc-binding alcohol dehydrogenase family protein
|
|
scnpilot_expt_750_bf_scaffold_412_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17451..18359
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2K3K9_9BURK
rbh
Transcriptional regulator {ECO:0000313|EMBL:EJL67848.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
LysR family transcriptional regulator
rbh
|
|
scnpilot_expt_750_bf_scaffold_412_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18452..19249)
|
3-oxoacyl-ACP reductase n=1 Tax=Variovorax paradoxus RepID=UPI000367CE58
rbh
putative oxidoreductase, SDR family
Putative oxidoreductase, SDR family {ECO:0000313|EMBL:AGU47911.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora
|
|
scnpilot_expt_750_bf_scaffold_412_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19358..19942)
|
Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD n=1 Tax=Variovorax sp. CF313 RepID=J2JIW7_9BURK
rbh
Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD {ECO:0000313|EMBL:EJL67850.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vari
PgdA-like protein
|
|
scnpilot_expt_750_bf_scaffold_412_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19932..21209)
|
pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase PgaC (EC:2.4.1.-)
N-glycosyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI00037A1838
rbh
Poly-beta-1,6 N-acetyl-D-glucosamine synthase {ECO:0000313|EMBL:EJL67851.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=
|
|
scnpilot_expt_750_bf_scaffold_412_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21206..23275)
|
pgaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB (EC:3.5.1.-)
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB n=1 Tax=Variovorax sp. CF313 RepID=J2SQM8_9BURK
rbh
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB {ECO:0000313|EMBL:EJL67852.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
|
|
scnpilot_expt_750_bf_scaffold_412_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23275..25872)
|
Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=1 Tax=Variovorax sp. CF313 RepID=J2K3L6_9BURK
rbh
Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:EJL67853.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
putative poly-beta-1,6-N-acetyl-D-glucosamine export porin PgaA
rbh
|
|
scnpilot_expt_750_bf_scaffold_412_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26169..26999
|
creatininase n=1 Tax=Variovorax paradoxus RepID=UPI0003784D59
rbh
Variovorax paradoxus strain MEDvA23 contig_44, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29624.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
creatininase
|
|
scnpilot_expt_750_bf_scaffold_412_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27013..27984)
|
Threonine dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J2JIX6_9BURK
rbh
Threonine dehydratase {ECO:0000313|EMBL:EJL67860.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
pyridoxaL-5'-phosphate-dependent protein beta subunit
|
|
scnpilot_expt_750_bf_scaffold_412_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28006..28638)
|
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8J4_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_44, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29622.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
lysine exporter protein LysE/YggA
|
|
scnpilot_expt_750_bf_scaffold_412_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28644..29336)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2SQN8_9BURK
rbh
Variovorax paradoxus strain MEDvA23 contig_44, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29621.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
|
|
scnpilot_expt_750_bf_scaffold_412_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29352..30284)
|
Phenazine biosynthesis protein PhzF family n=1 Tax=Variovorax sp. CF313 RepID=J2K3M6_9BURK
rbh
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:EJL67863.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
phenazine biosynthesis protein phzf family
|
|
scnpilot_expt_750_bf_scaffold_412_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30281..30922)
|
glutathione S-transferase n=1 Tax=Variovorax paradoxus RepID=UPI00037ED6A5
rbh
Variovorax paradoxus strain MEDvA23 contig_44, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29619.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
glutathione s-transferase domain-containing protein
|
|
scnpilot_expt_750_bf_scaffold_412_29
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30973..31809)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000371C8B8
rbh
Phenazine biosynthesis family protein {ECO:0000313|EMBL:CDX26818.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
phenazine biosynthesis family protein
|
|
scnpilot_expt_750_bf_scaffold_412_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31820..32458)
|
Putative threonine efflux protein n=1 Tax=Variovorax sp. CF313 RepID=J2JIY0_9BURK
rbh
Putative threonine efflux protein {ECO:0000313|EMBL:EJL67865.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
lysine exporter protein LysE/YggA
|