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scnpilot_expt_750_bf_scaffold_889

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_889_1
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(512..1657)
DNA (1146bp) protein (382aa)
ferredoxin n=1 Tax=Amorphus coralli RepID=UPI000381CD2E
Uncharacterized protein {ECO:0000313|EMBL:KEJ93902.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter p
phenylacetate-CoA oxygenase/reductase subunit PaaK
scnpilot_expt_750_bf_scaffold_889_2
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1700..2212)
DNA (513bp) protein (171aa)
Phenylacetate-CoA oxygenase, PaaJ subunit n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T299_9BURK
Phenylacetate-CoA oxygenase {ECO:0000313|EMBL:KEJ93901.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobact
phenylacetate-CoA oxygenase subunit PaaJ
scnpilot_expt_750_bf_scaffold_889_3
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2206..2967)
DNA (762bp) protein (254aa)
Phenylacetate-CoA oxygenase, PaaI subunit n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VJ57_RHOPX
Phenylacetic acid degradation protein {ECO:0000313|EMBL:KEJ93900.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="S
phenylacetate-CoA oxygenase subunit PaaI
scnpilot_expt_750_bf_scaffold_889_4
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2967..3260)
DNA (294bp) protein (98aa)
phenylacetate-CoA oxygenase subunit PaaB n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B75557
Phenylacetate-CoA oxygenase {ECO:0000313|EMBL:KEJ93899.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobact
phenylacetate-CoA oxygenase subunit PaaB
scnpilot_expt_750_bf_scaffold_889_5
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3276..4265)
DNA (990bp) protein (330aa)
Phenylacetate-CoA oxygenase subunit PaaA n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LSN4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KEJ93898.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter p
paaA; phenylacetate-CoA oxygenase subunit PaaA
scnpilot_expt_750_bf_scaffold_889_6
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4448..5173)
DNA (726bp) protein (242aa)
High-affinity branched-chain amino acid transport, ATP-binding protein n=38 Tax=Bordetella RepID=F4LA28_BORPC
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEJ93897.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sul
livF; high-affinity branched-chain amino acid transport ATP-binding protein
scnpilot_expt_750_bf_scaffold_889_7
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5170..5934)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PE14_9BRAD
Leucine/isoleucine/valine transporter ATP-binding subunit {ECO:0000313|EMBL:KEJ93896.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfit
branched-chain amino acid ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_889_8
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5918..6886)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036B0B63 rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KEJ93895.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter
inner-membrane translocator
scnpilot_expt_750_bf_scaffold_889_9
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6879..7751)
DNA (873bp) protein (291aa)
ABC transporter permease n=1 Tax=Amorphus coralli RepID=UPI00035DF61D
ABC transporter permease {ECO:0000313|EMBL:KEJ93894.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter
high-affinity branched-chain amino acid transport system, permease protein
scnpilot_expt_750_bf_scaffold_889_10
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7783..8922)
DNA (1140bp) protein (380aa)
Extracellular ligand-binding receptor n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDQ1_XANP2
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEJ93893.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" sourc
extracellular ligand-binding receptor
scnpilot_expt_750_bf_scaffold_889_11
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8990..9424)
DNA (435bp) protein (145aa)
phenylacetic acid degradation protein PaaD (EC:3.1.2.23)
Phenylacetic acid degradation protein PaaD n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XSY1_PARAH
Uncharacterized protein {ECO:0000313|EMBL:KEJ93892.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter p
scnpilot_expt_750_bf_scaffold_889_12
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9421..10218)
DNA (798bp) protein (266aa)
enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000371C90F
Enoyl-CoA hydratase {ECO:0000313|EMBL:KEJ93891.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseud
scnpilot_expt_750_bf_scaffold_889_13
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10414..11385
DNA (972bp) protein (324aa)
Phenylacetate-responsive transcriptional repressor n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5P0_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:KEJ93890.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter p
paaX; phenylacetate-responsive transcriptional repressor
scnpilot_expt_750_bf_scaffold_889_14
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11428..12561)
DNA (1134bp) protein (378aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Pseudomonas sp. GM21 RepID=J3EWZ0_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KEJ93887.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter p
epoxide hydrolase
scnpilot_expt_750_bf_scaffold_889_15
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12558..13043)
DNA (486bp) protein (162aa)
UPI0003C7DDF4 related cluster n=1 Tax=unknown RepID=UPI0003C7DDF4
Uncharacterized protein {ECO:0000313|EMBL:KEJ93888.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter p
maoC like domain protein
scnpilot_expt_750_bf_scaffold_889_16
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13045..14613)
DNA (1569bp) protein (523aa)
UPI0003C7F239 related cluster n=1 Tax=unknown RepID=UPI0003C7F239 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEJ93889.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter p
acyl-CoA synthetase
scnpilot_expt_750_bf_scaffold_889_17
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15194..15496
DNA (303bp) protein (101aa)
Mycobacterium llatzerense strain CLUC14 Mllat_contig000012, whole genome shotgun sequence {ECO:0000313|EMBL:KIU17038.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KIU17038.1};; TaxID=280871 species="Bacteria; Act
short chain enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI000381B7A9
scnpilot_expt_750_bf_scaffold_889_18
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15560..16744)
DNA (1185bp) protein (395aa)
beta-ketothiolase (EC:2.3.1.9)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA028 RepID=U8MJE1_PSEAI rbh
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:ERI50815.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. E
scnpilot_expt_750_bf_scaffold_889_19
unknown

Not on your lists

16801..16911
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 19 items

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