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scnpilot_expt_750_bf_scaffold_468_14

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(26842..27837)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037C59B7 similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 335.0
  • Bit_score: 583
  • Evalue 1.50e-163
  • rbh
Variovorax paradoxus strain MEDvA23 contig_76, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23247.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 331.0
  • Bit_score: 566
  • Evalue 2.70e-158
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 326.0
  • Bit_score: 356
  • Evalue 1.10e-95

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGCGCGCCCGTTCCCTGCTGACTCCGATATTCGCCCTGGGCGTGTTGTGGGCCGGCGTATCGCTCCCCCTGGCCGCGCAGGCGCAGCCCGCCGCCGGCGCTTACCCCTCGAAGCCGGTGCACATCACGGTCGCGAATACACCCGGCAGTTCGCCCGACGTGCTGGCCCGCTTCCTGGGGCAGCGGCTGTCGGAGCAGTGGAAGCAGCCGGTGGTGATCGACAACCGGGCCGGCGCGGCCGGCATCCTGGCGGCCGACGGCCTGGCCAAGGCGCAGCCCGACGGCTATTCGCTGCTGGTGGGCGCCGACGGGCCGATCACCATCCTTCCCAACATCCAGGCCGGCCTGCCCTACGACGCACGGCGCGACCTGGTGCCGGTGGTGTCGCTCGGCCAGATCGACTTCGTGCTGGTGGCCAACCCGAAGACGGGTTTTCGCACGGTGGCTGACTTCGTGCGCGCGGCCAAGGCCCATCCGGGGCGCATCAACTACGCCTCGGCCGGCAATGGCAGTCCGCAGCAGCTCAGCATGGAGCTGCTCAAGCAGAAGGCCGGTATTTACGTCACCCACATTCCGTACCGCGGCGGCCCGCTGGGCATGCAGGACGTGATTGCCGGCCAGGTCGACGTGATGTTCATCGCCGTGGGCCCGGCGCTGCCGCAGATCCGCAGCGGCCGGTTGGTGGCCCTGGGCACCAGCGGCGAGAAGCGCCATGCGCTGCTGCCCGAAGTGCCGACCGTGGGCGAGACCTATGCGGGCTACCGTTCGGGTACCTGGTTCGGGCTGTTCGCGCCGGCCCGCACGCCACAGCCGGTGATCGACGCCATCGCGGCAGATGCCGGCCGCATCGTGCAGACGCCGGCGGCCCGCGCCGAACTGGCGGCGCAGGGCATCGAGGCCACCGGCCATGCGCAGCGCCAGTTCCAGGCGCAGGTGTCGAGCGAATACGAGCGCTATGCGCAGATCGTGAAGGCGGTTGGCATCAAGGCCGAATAG
PROTEIN sequence
Length: 332
MRARSLLTPIFALGVLWAGVSLPLAAQAQPAAGAYPSKPVHITVANTPGSSPDVLARFLGQRLSEQWKQPVVIDNRAGAAGILAADGLAKAQPDGYSLLVGADGPITILPNIQAGLPYDARRDLVPVVSLGQIDFVLVANPKTGFRTVADFVRAAKAHPGRINYASAGNGSPQQLSMELLKQKAGIYVTHIPYRGGPLGMQDVIAGQVDVMFIAVGPALPQIRSGRLVALGTSGEKRHALLPEVPTVGETYAGYRSGTWFGLFAPARTPQPVIDAIAADAGRIVQTPAARAELAAQGIEATGHAQRQFQAQVSSEYERYAQIVKAVGIKAE*