ggKbase home page

scnpilot_expt_750_bf_scaffold_468_19

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(31592..32524)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003627839 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 292.0
  • Bit_score: 451
  • Evalue 8.50e-124
  • rbh
Variovorax paradoxus strain MEDvA23 contig_76, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ23240.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 292.0
  • Bit_score: 436
  • Evalue 3.90e-119
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 294.0
  • Bit_score: 430
  • Evalue 5.70e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGCCGATTTTCGGCGACCTGCAGGGGCCGGTTTTTTCAACACAATCGGCATCCATGGGCGAACGCCTTTTCCTCCGGCTCGAAGACGACCCCTTGCACGGGCCGGAGTCGGCCATGCCCGCCGGCACGCTGCGCGCATTTCCGGTGAGCGCCGCGCTGCGCGGGCATGTGTCGCACGTCATGCTGTACCGCGAGACTTTTGCGGAAGGCCACGAGATGCGCGAGCGGGTGCTGCCCGACGGCGCGGTGCGGCTGGTCTTCAACTTCGGCGATGCGCCTTCCGCCGGGAGCAGTGATGGCGGCGGCCTGGCGGTGGAAGCCATCGGCGCTTCGGCCGCGCCCGTCGTGGTGCGCATGCGGCGCAAGGTCGAAGGGCTTTCCGTCACGCTGCGCGCCGGTGCCGCGGCGTCGTTGCTGGGGCTGCCGGCCGGCGAGATCGGCGGCGGCGCGGTCCATCTCGATGCGCTGTGGCGGGGGGAGGGTTCGGCGCTGCTCGAGCGCATGGCCGAAATGCCCGACGACGCCGGGCGTGTCGCGCTGCTGCAGGCGGCCCTGTTGCACCGCCTGGGCGACAACCGCATCGCCGCGGGTAACGACATCGCCATGCAGGCGGCGCGGCTGATCGCGGAGGCCGAAGGGCGCCTGCGGCTGCGCGACGTGGCCTCGACGGTCGGTGTCGGCGAACGGCGCCTGCAGCAGCTCTTTCATGCACACGTCGGCCTGTCGCCGCGCGCCTGGAGCCGGCTCGCGCGGATGCACGGTTGCCTGCGCGCGCTGCGGCGGCGGCCGGTGCCGGCCTGGGCGGAGGTCGCGCTGGAGGGCGGTTTCTACGACCAGTCGCACCTCGTCAACGAGTTCCGAGCGCTGTGCGGTGTCACGCCGACCGAGTTCCTGGGACGCGCGGCTTCGGGTTCTTCCAAGACGGGCGGTTGA
PROTEIN sequence
Length: 311
MPIFGDLQGPVFSTQSASMGERLFLRLEDDPLHGPESAMPAGTLRAFPVSAALRGHVSHVMLYRETFAEGHEMRERVLPDGAVRLVFNFGDAPSAGSSDGGGLAVEAIGASAAPVVVRMRRKVEGLSVTLRAGAAASLLGLPAGEIGGGAVHLDALWRGEGSALLERMAEMPDDAGRVALLQAALLHRLGDNRIAAGNDIAMQAARLIAEAEGRLRLRDVASTVGVGERRLQQLFHAHVGLSPRAWSRLARMHGCLRALRRRPVPAWAEVALEGGFYDQSHLVNEFRALCGVTPTEFLGRAASGSSKTGG*