ggKbase home page

scnpilot_expt_750_bf_scaffold_468_21

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(33201..34103)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V774_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 296.0
  • Bit_score: 530
  • Evalue 8.10e-148
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 296.0
  • Bit_score: 530
  • Evalue 2.30e-148
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU38370.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 296.0
  • Bit_score: 530
  • Evalue 1.10e-147

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGAAACCCAATCAGTTGCACGCCTTCGTGGCGGTGGTCGAGCAGATGAGCATCCGCGCCGCGGCCCGGATGCTGGGGCTGTCGCAGCCCGCGGTGACGAAGATCGTGCGCGAGCTGGAGCGCGAGGTGGGCGCGCCGCTGGTGGAGCGCAGCGTCAAGGGCGTGCGGCTCACCGAGTTCGGCCAGGCCTTCGCGCCGCGTGCGCGGCTGCTGCTGGCCGACATGCAGCGCGCGCGGGACGAGATCGCGCAGATCCGCGACGGCGCCACCGGCACGGTGTCGATGGCGGTGAGCGCATCGTTCGCGCTCACCGTGCTGCCGACCGCTTTCAAGGACTTCCACACCCGCCTGCCCGCCGTCGACGTGCAGTTCAGCGAAGCGGTGCTGCCGTGGATGCTGGCGCGGCTGCGCGACGGCTACCTCGACTTTGCGGTGGCCCACGTGGTGCCTGGCACGCTCGATCCGCAGTTCGAGGCGCTGGAGCTGTTTCCGGTGCAACTGGTGGTGGGCATGCGCAACCGCCATCCGCTGCGCGGCGCGCGCTCGCTGCTCGACCTGTACCCGGCCGAATGGATCTTGCCGGGCGACGACGACCGCGGGCGCGAGTCGGTGGCGCCGCTGTTCACTCCGCTGGGGCTGCCGCCACCCTCGCGCATCATCCAGGGGCAGTCGGTGACGGTGGCGCTCGGGCTGGTGGGCAACATGGATTTGATCGGCCTGTTCGTCGAGCCGCTGGTCAAGCTGACTTTCAAGCGGCACGGCATCCGCCGGGTCGACGTTGACGAGGTGCTGCCGATGCTCAACGTGTGTGTGCTGCGGCGCAAGGGACAGTTGTCGACGCCGGCGGCGCAGCACTTCATCGAGTGCATCCAGCGTGCGTCGGCGGCGGAGATGCTGGCCTAG
PROTEIN sequence
Length: 301
MKPNQLHAFVAVVEQMSIRAAARMLGLSQPAVTKIVRELEREVGAPLVERSVKGVRLTEFGQAFAPRARLLLADMQRARDEIAQIRDGATGTVSMAVSASFALTVLPTAFKDFHTRLPAVDVQFSEAVLPWMLARLRDGYLDFAVAHVVPGTLDPQFEALELFPVQLVVGMRNRHPLRGARSLLDLYPAEWILPGDDDRGRESVAPLFTPLGLPPPSRIIQGQSVTVALGLVGNMDLIGLFVEPLVKLTFKRHGIRRVDVDEVLPMLNVCVLRRKGQLSTPAAQHFIECIQRASAAEMLA*