ggKbase home page

scnpilot_expt_750_bf_scaffold_83

Search features with annotation key words

Displaying items 1-30 of 238 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_83_1
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

119..1990
DNA (1872bp) protein (624aa)
Dipeptide porter n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AKK1_9ACTN rbh
Dipeptide porter {ECO:0000313|EMBL:EAR24229.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
peptide ABC transporter, substrate-binding protein
scnpilot_expt_750_bf_scaffold_83_2
unknown

Not on your lists

comp(2032..2160)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_83_3
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2194..3729
DNA (1536bp) protein (512aa)
Putative peptide ABC transporter, permease component n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CT29_CLAM3
ABC transporter permease {ECO:0000313|EMBL:AJW79452.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidio
putative peptide ABC transporter permease
scnpilot_expt_750_bf_scaffold_83_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3731..4924
DNA (1194bp) protein (398aa)
ABC transporter, permease protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4ALH1_9ACTN rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EAR23762.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
putative oligopeptide ABC transporter permease
scnpilot_expt_750_bf_scaffold_83_5
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4915..5520)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030B9C00
Membrane protein {ECO:0000313|EMBL:EYR63876.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_83_6
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5550..7301
DNA (1752bp) protein (584aa)
Peptide ABC transporter, ATP-binding protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BA70_9MICO
peptide ABC transporter, ATP-binding protein
Peptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CCE76089.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michig
scnpilot_expt_750_bf_scaffold_83_7
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7318..9303
DNA (1986bp) protein (662aa)
GTP-binding elongation factor n=1 Tax=Microbacterium sp. TS-1 RepID=U2X5S7_9MICO rbh
GTP-binding protein TypA {ECO:0000313|EMBL:KIC57750.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
membrane GTPase
scnpilot_expt_750_bf_scaffold_83_8
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9508..9858)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XP94_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK36734.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (st
scnpilot_expt_750_bf_scaffold_83_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9903..10649
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030496CF rbh
AzlC family protein {ECO:0000313|EMBL:CDJ98908.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
branched-chain amino acid permease
scnpilot_expt_750_bf_scaffold_83_10
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10652..10960
DNA (309bp) protein (103aa)
branched-chain amino acid transporter AzlD n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036942F2
Predicted GTPase {ECO:0000313|EMBL:CDJ98909.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
GTPase
scnpilot_expt_750_bf_scaffold_83_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11024..11488
DNA (465bp) protein (155aa)
Histidinol dehydrogenase n=2 Tax=Microbacterium RepID=H8E8C6_9MICO
Histidinol dehydrogenase {ECO:0000313|EMBL:EIC06836.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium l
histidinol dehydrogenase
scnpilot_expt_750_bf_scaffold_83_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11521..11832
DNA (312bp) protein (104aa)
ferredoxin n=1 Tax=Microbacterium yannicii RepID=UPI00031965FB
Ferredoxin {ECO:0000313|EMBL:KJL37274.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ferredoxin
scnpilot_expt_750_bf_scaffold_83_13
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11839..12954
DNA (1116bp) protein (372aa)
N-succinyldiaminopimelate aminotransferase {ECO:0000313|EMBL:KIC57744.1}; EC=2.6.1.17 {ECO:0000313|EMBL:KIC57744.1};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Succinyldiaminopimelate transaminase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8C4_9MICO rbh
aspartate/tyrosine/aromatic aminotransferase
scnpilot_expt_750_bf_scaffold_83_14
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13056..14348
DNA (1293bp) protein (431aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbact
Citrate synthase n=2 Tax=Microbacterium RepID=H8E8C3_9MICO rbh
gltA; citrate synthase
scnpilot_expt_750_bf_scaffold_83_15
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14394..15209)
DNA (816bp) protein (272aa)
Polyphosphate kinase 2 n=2 Tax=Microbacterium RepID=H8E8C1_9MICO rbh
Polyphosphate kinase 2 {ECO:0000313|EMBL:EPD83984.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str
hypothetical protein
scnpilot_expt_750_bf_scaffold_83_16
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15229..16188)
DNA (960bp) protein (320aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003776C09 rbh
dapD; tetrahydrodipicolinate N-succinyltransferase
scnpilot_expt_750_bf_scaffold_83_17
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16260..17336
DNA (1077bp) protein (359aa)
Succinyl-diaminopimelate desuccinylase n=2 Tax=Microbacterium RepID=H8E8B9_9MICO rbh
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:EIC06829.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevan
dapE; acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase
scnpilot_expt_750_bf_scaffold_83_18
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17318..18544
DNA (1227bp) protein (409aa)
Integral membrane protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8B8_9MICO rbh
Membrane protein {ECO:0000313|EMBL:KIC57739.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
integral membrane protein
scnpilot_expt_750_bf_scaffold_83_19
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18668..18841
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E8B7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52938.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_83_20
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18910..19551)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B5Y0_9MICO rbh
Methyltransferase {ECO:0000313|EMBL:KIC57738.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
O-methyltransferase
scnpilot_expt_750_bf_scaffold_83_21
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19624..20010
DNA (387bp) protein (129aa)
Sec-independent protein secretion pathway component protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E8B5_9MICO
Translocase {ECO:0000313|EMBL:KIC57737.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
tatB; Sec-independent protein secretion pathway components
scnpilot_expt_750_bf_scaffold_83_22
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20022..21167)
DNA (1146bp) protein (382aa)
ATPase-like, ParA/MinD n=2 Tax=Microbacterium RepID=H8E8B4_9MICO rbh
Sodium:proton antiporter {ECO:0000313|EMBL:EXJ51576.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ATPase
scnpilot_expt_750_bf_scaffold_83_23
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21164..21703)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Microbacterium RepID=UPI000369AB29
Putative membrane protein {ECO:0000313|EMBL:EZP27036.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_83_24
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21700..22947)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A4J3_9MICO rbh
Magnesium transporter {ECO:0000313|EMBL:KIC57734.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Mg/Co/Ni transporter MgtE
scnpilot_expt_750_bf_scaffold_83_25
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23059..23667
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E8B1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51573.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_83_26
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23670..24347
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003825566
Hydrolase of the alpha/beta-hydrolase fold-containing protein {ECO:0000313|EMBL:EZP27039.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
hydrolase of the alpha/beta-hydrolase fold
scnpilot_expt_750_bf_scaffold_83_27
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24367..25788)
DNA (1422bp) protein (474aa)
Xaa-Pro aminopeptidase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5T7_9MICO rbh
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:EXJ51571.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Xaa-Pro aminopeptidase
scnpilot_expt_750_bf_scaffold_83_28
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25833..26864)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3APA7_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD83997.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
hypothetical protein
scnpilot_expt_750_bf_scaffold_83_29
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26965..27828
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A4J6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD83998.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
metal-dependent phosphoesterase
scnpilot_expt_750_bf_scaffold_83_30
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27863..28279)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F98702
Integral membrane protein {ECO:0000313|EMBL:CDJ99414.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
Displaying items 1-30 of 238 in total

View Taxonomy