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scnpilot_expt_750_bf_scaffold_201

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Displaying items 1-30 of 349 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_201_1
unknown

Not on your lists

2..262
DNA (261bp) protein (87aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_201_2
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(284..1528)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HM89_ACHXA rbh
Membrane protein {ECO:0000313|EMBL:KGD88096.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_201_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1696..2049
DNA (354bp) protein (118aa)
putative lactoylglutathione lyase protein (EC:4.4.1.5)
glyoxalase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003614F6D
Glyoxalase {ECO:0000313|EMBL:KKB10466.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
scnpilot_expt_750_bf_scaffold_201_4
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2046..2744
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I3E0_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP44160.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
scnpilot_expt_750_bf_scaffold_201_5
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2791..3480
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5F9_LEPCP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB33547.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 5116
scnpilot_expt_750_bf_scaffold_201_6
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3489..4424
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000368E90A rbh
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:ERJ36674.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkhold
luciferase family protein
scnpilot_expt_750_bf_scaffold_201_7
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4432..5139)
DNA (708bp) protein (236aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12H60_POLSJ
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABE42132.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromon
scnpilot_expt_750_bf_scaffold_201_8
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5141..6031)
DNA (891bp) protein (297aa)
phhA; phenylalanine 4-monooxygenase (EC:1.14.16.1)
Phenylalanine 4-hydroxylase {ECO:0000313|EMBL:ABM36433.1}; EC=1.14.16.1 {ECO:0000313|EMBL:ABM36433.1};; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
Phenylalanine 4-hydroxylase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VLA5_POLNA rbh
scnpilot_expt_750_bf_scaffold_201_9
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6041..6340)
DNA (300bp) protein (100aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y213_LEPCP
transcriptional coactivator/pterin dehydratase
scnpilot_expt_750_bf_scaffold_201_10
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6419..7387)
DNA (969bp) protein (323aa)
Candidate extracytoplasmic binding receptor n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4L9_RAMTT
Putative twin-arginine translocation pathway signal {ECO:0000313|EMBL:KGJ68178.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;
tctC; extracytoplasmic binding receptor
scnpilot_expt_750_bf_scaffold_201_11
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7450..8880)
DNA (1431bp) protein (477aa)
Putative sulfatase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T9Y0_ALCXX
Putative sulfatase {ECO:0000313|EMBL:EGP42868.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis
sulfatase
scnpilot_expt_750_bf_scaffold_201_12
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9022..9519
DNA (498bp) protein (166aa)
MarR family transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036138D4
Transcriptional regulator {ECO:0000313|EMBL:EJZ35523.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
MarR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_201_13
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9529..9945)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CBV8_ALCDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT69142.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dies
scnpilot_expt_750_bf_scaffold_201_14
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10011..11210)
DNA (1200bp) protein (400aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KHD17522.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KHD17522.1};; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderia
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QL90_RALPI
scnpilot_expt_750_bf_scaffold_201_15
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11422..13827)
DNA (2406bp) protein (802aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GP27_PUSST rbh
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AEC21690.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;"
scnpilot_expt_750_bf_scaffold_201_16
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14151..14513
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8J011_HERSS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ62348.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum s
scnpilot_expt_750_bf_scaffold_201_17
Trypanosoma vivax, Trypanosoma, Kinetoplastida, Eukaryota

Not on your lists

comp(14540..15811)
DNA (1272bp) protein (424aa)
Leucine-rich repeat protein, putative n=1 Tax=Trypanosoma vivax (strain Y486) RepID=F9WTW6_TRYVY
Leucine-rich repeat protein, putative {ECO:0000313|EMBL:CCD21012.1}; TaxID=1055687 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma; Duttonella.;" source="Trypanosoma viva
expression site-associated gene (ESAG) protein; expression site-associated gene 8 (ESAG8)
scnpilot_expt_750_bf_scaffold_201_18
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15870..18104)
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HQM5_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJN02901.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum
hypothetical protein
scnpilot_expt_750_bf_scaffold_201_19
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18123..18602)
DNA (480bp) protein (160aa)
Tir chaperone protein (CesT) n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VAH3_9BURK
Tir chaperone protein (CesT) {ECO:0000313|EMBL:EJN02902.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspiri
dapA; dihydrodipicolinate synthase/N-acetylneuraminate lyase N-terminal protein
scnpilot_expt_750_bf_scaffold_201_20
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18935..20845
DNA (1911bp) protein (637aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J3CCH3_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJN02904.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum
scnpilot_expt_750_bf_scaffold_201_21
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20948..22075
DNA (1128bp) protein (376aa)
Aspartate racemase n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VRZ1_9BURK rbh
Aspartate racemase {ECO:0000313|EMBL:EJN02905.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. Y
racD-1; aspartate racemase
scnpilot_expt_750_bf_scaffold_201_22
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22132..22659
DNA (528bp) protein (176aa)
Tir chaperone protein (CesT) n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HQM7_9BURK
Tir chaperone protein (CesT) {ECO:0000313|EMBL:EJN02906.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspiri
hypothetical protein
scnpilot_expt_750_bf_scaffold_201_23
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22746..24143)
DNA (1398bp) protein (466aa)
Putative enzyme of poly-gamma-glutamate biosynthesis (Capsule formation) n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VAH5_9BURK rbh
Putative enzyme of poly-gamma-glutamate biosynthesis (Capsule formation) {ECO:0000313|EMBL:EJN02907.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacte
poly-gamma-glutamate biosynthesis protein
scnpilot_expt_750_bf_scaffold_201_24
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24156..25016)
DNA (861bp) protein (287aa)
beta-lactamase (EC:3.5.2.6)
Beta-lactamase class A n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HR10_9BURK rbh
Beta-lactamase class A {ECO:0000313|EMBL:EJN02908.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum s
scnpilot_expt_750_bf_scaffold_201_25
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25068..25931)
DNA (864bp) protein (288aa)
N-formylglutamate amidohydrolase n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VRZ4_9BURK rbh
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:EJN02910.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbas
N-formylglutamate amidohydrolase
scnpilot_expt_750_bf_scaffold_201_26
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25928..26971)
DNA (1044bp) protein (348aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HQN0_9BURK rbh
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJN02911.1}; Flags: Precursor;; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxal
oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein
scnpilot_expt_750_bf_scaffold_201_27
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26950..27906)
DNA (957bp) protein (319aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VAI0_9BURK rbh
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJN02912.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herba
oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein rbh
scnpilot_expt_750_bf_scaffold_201_28
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27916..28905)
DNA (990bp) protein (330aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HR12_9BURK rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJN02913.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxaloba
h16_A1302; ABC transporter permease
scnpilot_expt_750_bf_scaffold_201_29
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28923..29894)
DNA (972bp) protein (324aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Herbaspirillum sp. YR522 RepID=J3CCH9_9BURK rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJN02914.1}; Flags: Precursor;; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
peptide ABC transporter
scnpilot_expt_750_bf_scaffold_201_30
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30206..31786)
DNA (1581bp) protein (527aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HQN2_9BURK rbh
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EJN02916.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbas
extracellular solute-binding protein
Displaying items 1-30 of 349 in total

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