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scnpilot_expt_750_bf_scaffold_579

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_579_1
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..241
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Montevideo str. S5-403 RepID=G5Q9N6_SALMO
Uncharacterized protein {ECO:0000313|EMBL:CEG52175.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xantho
scnpilot_expt_750_bf_scaffold_579_2
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(277..1746)
DNA (1470bp) protein (490aa)
Trk system potassium uptake protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SYE1_ALCXX rbh
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achr
potassium transporter Trk rbh
scnpilot_expt_750_bf_scaffold_579_3
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1765..3141)
DNA (1377bp) protein (459aa)
Potassium transporter peripheral membrane component n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SYE2_ALCXX rbh
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:EGP46847.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;
trkA; potassium transporter peripheral membrane component
scnpilot_expt_750_bf_scaffold_579_4
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3138..3872)
DNA (735bp) protein (245aa)
Two-component system response regulator n=2 Tax=Bordetella holmesii RepID=M5NLT6_9BORD rbh
response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:KAK78836.1}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bo
scnpilot_expt_750_bf_scaffold_579_5
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3890..6373)
DNA (2484bp) protein (828aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bo
GHKL domain protein n=31 Tax=Bordetella RepID=V8UFV3_BORBO rbh
two-component sensor kinase
scnpilot_expt_750_bf_scaffold_579_6
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6370..7215)
DNA (846bp) protein (282aa)
Putative exported protein n=3 Tax=Bordetella bronchiseptica RepID=K0MCE0_BORBM
PF14334 domain protein {ECO:0000313|EMBL:KCV59771.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchisept
hypothetical protein
scnpilot_expt_750_bf_scaffold_579_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7212..8531)
DNA (1320bp) protein (440aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752, ECO:0000313|EMBL:CKI21745.1}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=85698 species="Bacteria; Proteobacteria
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SYE6_ALCXX rbh
methyltransferase
scnpilot_expt_750_bf_scaffold_579_8
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8531..9478)
DNA (948bp) protein (316aa)
Methionyl-tRNA formyltransferase (EC:2.1.2.9) rbh
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1167634 species="
Methionyl-tRNA formyltransferase n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XTI3_ALCXX rbh
scnpilot_expt_750_bf_scaffold_579_9
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9680..10180)
DNA (501bp) protein (167aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FB38D3
scnpilot_expt_750_bf_scaffold_579_10
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10442..11551
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IFQ5_BORPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP45080.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
scnpilot_expt_750_bf_scaffold_579_11
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11665..12123
DNA (459bp) protein (153aa)
Protein Smg homolog n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F006_9BURK
Protein Smg homolog {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsen
hypothetical protein
scnpilot_expt_750_bf_scaffold_579_12
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12374..15025
DNA (2652bp) protein (884aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=562971 species="Bacteria; Proteobac
DNA topoisomerase n=1 Tax=Achromobacter piechaudii HLE RepID=J4QJP0_9BURK rbh
DNA topoisomerase III
scnpilot_expt_750_bf_scaffold_579_13
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15037..15606
DNA (570bp) protein (190aa)
SET domain-containing protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037756AD
SET domain protein {ECO:0000313|EMBL:KCB40210.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_579_14
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15651..16394)
DNA (744bp) protein (248aa)
Rickettsia 17 kDa surface antigen family protein 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HQP7_ACHXA
rickettsia 17 kDa surface antigen family protein 1
Rickettsia 17 kDa surface antigen family protein 1 {ECO:0000313|EMBL:ADP13587.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;"
scnpilot_expt_750_bf_scaffold_579_15
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16534..16779
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QQB7_BORBO
hypothetical protein
PF12512 family protein {ECO:0000313|EMBL:KCV59171.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchisept
scnpilot_expt_750_bf_scaffold_579_16
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16769..17617)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4U6L9_BORBO
Uncharacterized protein {ECO:0000313|EMBL:CCN25387.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchisep
hypothetical protein
scnpilot_expt_750_bf_scaffold_579_17
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17767..18759
DNA (993bp) protein (331aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:ADN61946.1}; EC=1.1.1.169 {ECO:0000313|EMBL:ADN61946.1};; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholde
2-dehydropantoate 2-reductase n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TIN7_BURSG rbh
scnpilot_expt_750_bf_scaffold_579_18
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18885..19754
DNA (870bp) protein (290aa)
Fumarase alpha subunit {ECO:0000313|EMBL:ABM58790.1}; EC=4.2.1.2 {ECO:0000313|EMBL:ABM58790.1};; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ve
Fumarase alpha subunit n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WMD3_VEREI
tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha
scnpilot_expt_750_bf_scaffold_579_19
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19775..20404
DNA (630bp) protein (210aa)
Fumarate hydratase class I beta subunit n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2L8L8_BURGS
fumarase family protein
Fumarase family protein {ECO:0000313|EMBL:KGC11509.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source=
scnpilot_expt_750_bf_scaffold_579_20
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20444..21424
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023781C3
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM58792.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter
scnpilot_expt_750_bf_scaffold_579_21
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21566..22186
DNA (621bp) protein (207aa)
Flavin reductase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QSK9_9BURK
Flavin reductase {ECO:0000313|EMBL:EYC50749.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. N
putative FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family
scnpilot_expt_750_bf_scaffold_579_22
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22321..23076
DNA (756bp) protein (252aa)
aldolase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023781C2
Aldolase {ECO:0000313|EMBL:EYC50750.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R
HpcH/HpaI aldolase
scnpilot_expt_750_bf_scaffold_579_23
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23108..23971
DNA (864bp) protein (288aa)
Uncharacterized protein {ECO:0000313|EMBL:EYC50751.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis
Putative uncharacterized protein id=1269054 bin=GWE1_Burkholderiales_65_30 species=Paracoccus denitrificans genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
scnpilot_expt_750_bf_scaffold_579_24
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23968..24735)
DNA (768bp) protein (256aa)
transcriptional regulator n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377E3C
transcriptional regulator, IclR family
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AJK49196.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
scnpilot_expt_750_bf_scaffold_579_25
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24818..25771)
DNA (954bp) protein (318aa)
Amidohydrolase 2 n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2L8M3_BURGS rbh
Amidohydrolase {ECO:0000313|EMBL:EYC50748.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Nia
amidohydrolase 2
scnpilot_expt_750_bf_scaffold_579_26
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25969..26634
DNA (666bp) protein (222aa)
TetR family transcriptional regulator n=1 Tax=Advenella kashmirensis W13003 RepID=V8QVG8_9BURK
TetR family transcriptional regulator {ECO:0000313|EMBL:ETF03348.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmiren
psrA; Transcriptional regulator PsrA
scnpilot_expt_750_bf_scaffold_579_27
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26655..27440
DNA (786bp) protein (262aa)
Cyclase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QUL8_9BURK rbh
Cyclase {ECO:0000313|EMBL:ETF03347.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
cyclase rbh
scnpilot_expt_750_bf_scaffold_579_28
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27493..28467
DNA (975bp) protein (325aa)
MFS transporter n=1 Tax=Advenella kashmirensis W13003 RepID=V8QTS3_9BURK rbh
MFS transporter {ECO:0000313|EMBL:ETF03346.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_579_29
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28595..28906
DNA (312bp) protein (104aa)
[2Fe-2S]-binding domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X5U1_9BURK
bacterioferritin-associated ferredoxin
[2Fe-2S]-binding domain protein {ECO:0000313|EMBL:EFF77879.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
scnpilot_expt_750_bf_scaffold_579_30
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29273..29749
DNA (477bp) protein (159aa)
Bacterioferritin n=38 Tax=Bordetella RepID=F4L8N3_BORPC
bfr; bacterioferritin
Bacterioferritin {ECO:0000256|RuleBase:RU000623}; TaxID=257313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (strai
Displaying items 1-30 of 36 in total

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