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scnpilot_expt_750_bf_scaffold_211

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Displaying items 1-30 of 212 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_211_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227..1096)
DNA (870bp) protein (290aa)
Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQE1_9PROT rbh
Regulatory protein, LuxR:Response regulator receiver {ECO:0000313|EMBL:CCU61655.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospi
two component LuxR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_211_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1212..2369)
DNA (1158bp) protein (386aa)
Probable two-component sensor, near polyamine transporter n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF97_9PROT rbh
Histidine kinase {ECO:0000313|EMBL:KIO49094.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
histidine kinase, dimerisation and phosphoacceptor region
scnpilot_expt_750_bf_scaffold_211_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2541..2846
DNA (306bp) protein (102aa)
vanillate O-demethylase oxidoreductase VanB n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174562B
Vanillate O-demethylase oxidoreductase VanB {ECO:0000313|EMBL:KIO50006.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
activator of HSP90 ATPase 1 family protein
scnpilot_expt_750_bf_scaffold_211_4
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2833..3177
DNA (345bp) protein (115aa)
Transcriptional regulator, ArsR family n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q4D5_METSZ
transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:BAQ18806.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacte
scnpilot_expt_750_bf_scaffold_211_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3129..3317
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:ABB73358.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
scnpilot_expt_750_bf_scaffold_211_6
Pseudomonas sp. FGI182, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3627..6299)
DNA (2673bp) protein (891aa)
Uncharacterized protein n=1 Tax=Arthrospira platensis C1 RepID=K1W8J6_ARTPT rbh
Uncharacterized protein {ECO:0000313|EMBL:AHD12781.1}; TaxID=1259844 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. F
chromosome partitioning ATPase
scnpilot_expt_750_bf_scaffold_211_7
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6296..6751)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BRE5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN70890.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
scnpilot_expt_750_bf_scaffold_211_8
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7108..7716)
DNA (609bp) protein (203aa)
Methyltransferase type 12 n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMS6_METSB rbh
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ACK52755.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silves
scnpilot_expt_750_bf_scaffold_211_9
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7732..8076)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CWF0_9RHIZ
Plasmid stabilization system protein {ECO:0000313|EMBL:EDQ35510.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea pho
plasmid stabilization system
scnpilot_expt_750_bf_scaffold_211_10
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8553..8882)
DNA (330bp) protein (110aa)
Putative transcriptional regulator n=1 Tax=Azoarcus sp. KH32C RepID=H0PZW3_9RHOO
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAL25601.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH
scnpilot_expt_750_bf_scaffold_211_11
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8879..9202)
DNA (324bp) protein (108aa)
addiction module killer protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037B335A
addiction module killer protein
Addiction module killer protein {ECO:0000313|EMBL:BAP88177.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
scnpilot_expt_750_bf_scaffold_211_12

Not on your lists

comp(9498..9944)
DNA (447bp) protein (149aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
recombinase n=1 Tax=Rhizobium leguminosarum RepID=UPI000360F729
twitching motility protein PilT
scnpilot_expt_750_bf_scaffold_211_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9944..10243)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N7J3_RHOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF83819.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
scnpilot_expt_750_bf_scaffold_211_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10394..11329)
DNA (936bp) protein (312aa)
Flagellar hook-associated protein FlgL n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGW0_9PROT rbh
Flagellar hook protein FlgL {ECO:0000313|EMBL:KIO49095.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira
flgL; flagellar hook-associated protein FlgL
scnpilot_expt_750_bf_scaffold_211_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11405..13315)
DNA (1911bp) protein (637aa)
Flagellar hook-associated protein FlgK n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH76_9PROT rbh
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:CCU61658.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="
flgK; flagellar hook-associated protein FlgK
scnpilot_expt_750_bf_scaffold_211_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13478..14443)
DNA (966bp) protein (322aa)
Flagellar protein FlgJ [peptidoglycan hydrolase] n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQE7_9PROT rbh
Flagellar protein FlgJ [peptidoglycan hydrolase] {ECO:0000313|EMBL:CCU61660.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
scnpilot_expt_750_bf_scaffold_211_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14443..15591)
DNA (1149bp) protein (383aa)
Flagellar P-ring protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF98_9PROT rbh
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobac
flgI; flagellar basal body P-ring protein
scnpilot_expt_750_bf_scaffold_211_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15601..16362)
DNA (762bp) protein (254aa)
Flagellar L-ring protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGW5_9PROT rbh
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonad
flgH; flagellar basal body L-ring protein
scnpilot_expt_750_bf_scaffold_211_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16407..17189)
DNA (783bp) protein (261aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH80_9PROT rbh
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:CCU61663.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="N
hypothetical protein
scnpilot_expt_750_bf_scaffold_211_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17539..18291)
DNA (753bp) protein (251aa)
Flagellar basal-body rod protein FlgF n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGQ9_9PROT rbh
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:CCU61664.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="N
flgF; flagellar basal body rod protein FlgF
scnpilot_expt_750_bf_scaffold_211_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18399..19619)
DNA (1221bp) protein (407aa)
Flagellar hook protein FlgE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQF3_9PROT rbh
Flagellar hook protein FlgE {ECO:0000313|EMBL:CCU61665.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospir
flgE; flagellar hook protein FlgE
scnpilot_expt_750_bf_scaffold_211_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19704..20372)
DNA (669bp) protein (223aa)
Flagellar basal-body rod modification protein FlgD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF99_9PROT rbh
Flagellar basal body rod modification protein FlgD {ECO:0000313|EMBL:KIO49102.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;
flgD; flagellar basal body rod modification protein
scnpilot_expt_750_bf_scaffold_211_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20384..20839)
DNA (456bp) protein (152aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9E6_NITMU
flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="
scnpilot_expt_750_bf_scaffold_211_24
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20854..21252)
DNA (399bp) protein (133aa)
Flagellar basal body rod protein FlgB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH84_9PROT
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source=
flagellar basal-body rod protein FlgB
scnpilot_expt_750_bf_scaffold_211_25
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21606..22337
DNA (732bp) protein (244aa)
Flagellar basal-body P-ring formation protein FlgA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQF9_9PROT rbh
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.
flageller protein FlgA
scnpilot_expt_750_bf_scaffold_211_26
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22600..22908
DNA (309bp) protein (103aa)
Anti-sigma-28 factor, FlgM n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFA0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49106.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
anti-sigma-28 factor FlgM
scnpilot_expt_750_bf_scaffold_211_27
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22923..23390
DNA (468bp) protein (156aa)
FlgN n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGX2_9PROT
Flagellar biosynthesis protein FlgN {ECO:0000313|EMBL:KIO49217.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitro
FlgN
scnpilot_expt_750_bf_scaffold_211_28
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23811..24710)
DNA (900bp) protein (300aa)
Flagellar motor rotation protein MotB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH88_9PROT rbh
Flagellar motor protein MotD {ECO:0000313|EMBL:KIO49218.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira
flagellar motor protein MotD
scnpilot_expt_750_bf_scaffold_211_29
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24914..25654)
DNA (741bp) protein (247aa)
Flagellar motor rotation protein MotA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGR8_9PROT rbh
Flagellar motor rotation protein MotA {ECO:0000313|EMBL:CCU61674.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="N
motC; flagellar motor protein
scnpilot_expt_750_bf_scaffold_211_30
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25636..26364)
DNA (729bp) protein (243aa)
RNA polymerase sigma factor FliA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQG7_9PROT rbh
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma
sigma 28 (flagella/sporulation)
Displaying items 1-30 of 212 in total

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