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scnpilot_expt_750_bf_scaffold_294

Search features with annotation key words

Displaying items 1-30 of 219 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_294_1
unknown

Not on your lists

1..285
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_294_2
unknown

Not on your lists

comp(256..414)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_294_trna_4
unknown

Not on your lists

comp(549..621)
DNA (73bp)
transferRNA
scnpilot_expt_750_bf_scaffold_294_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

882..1127
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8I9_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74932.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
scnpilot_expt_750_bf_scaffold_294_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1098..2306)
DNA (1209bp) protein (403aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=1288494 species="Bacteria; Proteobac
talA; bifunctional transaldolase/phosoglucose isomerase (EC:2.2.1.2)
Transaldolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHV3_9PROT
scnpilot_expt_750_bf_scaffold_294_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2479..3324
DNA (846bp) protein (282aa)
N-acyl homoserine lactone hydrolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHE2_9PROT rbh
Beta-lactamase {ECO:0000313|EMBL:KIO48479.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
putative AHL-lactonase
scnpilot_expt_750_bf_scaffold_294_6
unknown

Not on your lists

comp(3507..3605)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_294_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3816..4454
DNA (639bp) protein (213aa)
Transcriptional regulator n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J2_NITMU rbh
putative transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABB74929.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira m
scnpilot_expt_750_bf_scaffold_294_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4567..5268)
DNA (702bp) protein (234aa)
6-phosphogluconolactonase {ECO:0000313|EMBL:ABB74928.1}; EC=3.1.1.31 {ECO:0000313|EMBL:ABB74928.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonada
6-phosphogluconolactonase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J3_NITMU rbh
6-phosphogluconolactonase
scnpilot_expt_750_bf_scaffold_294_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5770..6174)
DNA (405bp) protein (135aa)
DoxX family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHV7_9PROT
GntR family transcriptional regulator {ECO:0000313|EMBL:KIO48476.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nit
DoxX
scnpilot_expt_750_bf_scaffold_294_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6476..6904)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG35_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48329.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_294_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7134..8039)
DNA (906bp) protein (302aa)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHF0_9PROT rbh
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:KIO48470.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosos
6-phosphogluconate dehydrogenase-like protein
scnpilot_expt_750_bf_scaffold_294_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8134..9252)
DNA (1119bp) protein (373aa)
transaldolase (EC:2.2.1.2)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=323848 species="Bacteria; Proteobact
Transaldolase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J8_NITMU rbh
scnpilot_expt_750_bf_scaffold_294_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9782..9982
DNA (201bp) protein (67aa)
Transcriptional regulator, XRE family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y595_NITMU
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABB76076.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Ni
scnpilot_expt_750_bf_scaffold_294_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10137..10928)
DNA (792bp) protein (264aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFK8_9PROT rbh
scnpilot_expt_750_bf_scaffold_294_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11069..11851
DNA (783bp) protein (261aa)
FIG005121: SAM-dependent methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHL3_9PROT rbh
FIG005121: SAM-dependent methyltransferase {ECO:0000313|EMBL:CCU61987.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sour
generic methyl-transferase
scnpilot_expt_750_bf_scaffold_294_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11848..12360
DNA (513bp) protein (171aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHW6_9PROT
ribonuclease H
scnpilot_expt_750_bf_scaffold_294_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12422..13153
DNA (732bp) protein (244aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III epsilon subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHF5_9PROT rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KIO48466.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitros
scnpilot_expt_750_bf_scaffold_294_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13182..14549
DNA (1368bp) protein (456aa)
Heavy metal RND efflux outer membrane protein,CzcC family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFL2_9PROT rbh
Heavy metal RND efflux outer membrane protein,CzcC family {ECO:0000313|EMBL:CCU61991.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitro
Outer membrane efflux protein
scnpilot_expt_750_bf_scaffold_294_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14604..15785
DNA (1182bp) protein (394aa)
Probable Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHL8_9PROT rbh
Probable Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:CCU61992.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitroso
secretion protein HlyD
scnpilot_expt_750_bf_scaffold_294_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15782..18847
DNA (3066bp) protein (1022aa)
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHX0_9PROT rbh
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:CCU61993.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitr
heavy metal efflux pump CzcA
scnpilot_expt_750_bf_scaffold_294_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18857..19183
DNA (327bp) protein (109aa)
Nitrogen regulatory protein P-II n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHF8_9PROT
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:CCU61994.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitros
nitrogen regulatory protein P-II (GlnB, GlnK)
scnpilot_expt_750_bf_scaffold_294_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19355..20737)
DNA (1383bp) protein (461aa)
Radical SAM n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8K3_NITMU rbh
Radical SAM protein {ECO:0000313|EMBL:KIO48465.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV
radical SAM family protein
scnpilot_expt_750_bf_scaffold_294_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20907..21398
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHN6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48464.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_294_24
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21578..22012)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8K4_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74917.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
scnpilot_expt_750_bf_scaffold_294_25
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22098..23009)
DNA (912bp) protein (304aa)
Cytochrome c family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKQ3_9PROT rbh
Cytochrome c family protein {ECO:0000313|EMBL:CCU64046.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospir
cytochrome c, class I
scnpilot_expt_750_bf_scaffold_294_26
unknown

Not on your lists

23768..24199
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_294_27
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24433..25785
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6U2_NITMU rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO50486.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_294_28
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25920..26510
DNA (591bp) protein (197aa)
SCO1/SenC n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82WZ1_NITEU
SCO1; SCO1/SenC
SCO1/SenC {ECO:0000313|EMBL:CAD84420.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain
scnpilot_expt_750_bf_scaffold_294_29
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26507..27178
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6U5_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75526.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
Displaying items 1-30 of 219 in total

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