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scnpilot_expt_750_bf_scaffold_322

Search features with annotation key words

Displaying items 1-30 of 186 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_322_1
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..154)
DNA (153bp) protein (51aa)
Amino acid permease n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82SC4_NITEU
amino acid permease
Amino acid permease {ECO:0000313|EMBL:CAD86331.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europae
scnpilot_expt_750_bf_scaffold_322_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(969..2483)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG91_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49092.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_322_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2594..3031)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEZ0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49087.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_322_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4081..4470)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DRB0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48998.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_322_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4599..5096)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y666_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KIO49083.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_322_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5538..5945)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J1_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KIO49083.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_322_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6184..6510)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J1_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KIO48118.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_322_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6832..7644)
DNA (813bp) protein (271aa)
O-methyltransferase, family 3 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAH9_NITMU rbh
Methyltransferase {ECO:0000313|EMBL:KIO49088.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;
O-methyltransferase family protein
scnpilot_expt_750_bf_scaffold_322_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7824..8168)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCY8_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73383.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
scnpilot_expt_750_bf_scaffold_322_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8746..9159
DNA (414bp) protein (138aa)
Regulator of nucleoside diphosphate kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH09_9PROT
Regulator of nucleoside diphosphate kinase {ECO:0000313|EMBL:CCU61779.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sour
GreA/GreB family elongation factor
scnpilot_expt_750_bf_scaffold_322_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9312..11033
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAI1_NITMU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74240.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" sourc
scnpilot_expt_750_bf_scaffold_322_12
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11222..11749)
DNA (528bp) protein (176aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=APT_NITMU rbh
scnpilot_expt_750_bf_scaffold_322_13
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11865..12434)
DNA (570bp) protein (190aa)
Site-specific recombinase n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PCC0_CELJU
ccrB; Site-specific recombinase
Site-specific recombinase {ECO:0000313|EMBL:ACE83360.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japoni
scnpilot_expt_750_bf_scaffold_322_trna_1
unknown

Not on your lists

11907..11995
DNA (89bp)
transferRNA
scnpilot_expt_750_bf_scaffold_322_14
unknown

Not on your lists

12545..12772
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_322_15
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13016..13201
DNA (186bp) protein (62aa)
UPI0003D5EAA4 related cluster n=1 Tax=unknown RepID=UPI0003D5EAA4
Uncharacterized protein {ECO:0000313|EMBL:ETI63511.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_322_16
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13630..13905
DNA (276bp) protein (92aa)
Plasmid maintenance system killer n=1 Tax=Microcystis aeruginosa PCC 9717 RepID=I4FTW4_MICAE
Plasmid maintenance system killer {ECO:0000313|EMBL:CCH99089.1}; TaxID=1160286 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC
plasmid maintenance system killer protein
scnpilot_expt_750_bf_scaffold_322_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13932..14234
DNA (303bp) protein (101aa)
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NC11_DESAR
XRE family transcriptional regulator {ECO:0000313|EMBL:ETX04944.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella s
XRE family transcriptional regulator
scnpilot_expt_750_bf_scaffold_322_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14633..14953
DNA (321bp) protein (107aa)
Putative antirestriction protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XK5_NITEU
Antirestriction protein {ECO:0000313|EMBL:KIO48296.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
antirestriction protein
scnpilot_expt_750_bf_scaffold_322_19
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14959..15237)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00037FC966
transposase IS3/IS911 family protein Tax=CG_Beta_01
transposase
scnpilot_expt_750_bf_scaffold_322_20
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15757..16926
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00036ED741
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
family 2 glycosyl transferase
scnpilot_expt_750_bf_scaffold_322_21
unknown

Not on your lists

comp(17285..17623)
DNA (339bp) protein (113aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_322_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17743..18234
DNA (492bp) protein (164aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y822_NITMU
Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ABB75099.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomon
scnpilot_expt_750_bf_scaffold_322_23
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18420..19160)
DNA (741bp) protein (247aa)
4'-phosphopantetheinyl transferase n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J5H4_PSEUL
4'-phosphopantetheinyl transferase
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:BAK77319.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Ps
scnpilot_expt_750_bf_scaffold_322_24
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19448..24220
DNA (4773bp) protein (1591aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00031885C3 rbh
Non-ribosomal peptide synthase/amino acid adenylation enzyme {ECO:0000313|EMBL:AFZ17608.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" sourc
non-ribosomal peptide synthase/amino acid adenylation enzyme
scnpilot_expt_750_bf_scaffold_322_25
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24243..30113
DNA (5871bp) protein (1957aa)
Chondramide synthase cmdD n=1 Tax=Chondromyces crocatus RepID=CHSAD_CHOCO rbh
Uncharacterized protein {ECO:0000313|EMBL:AHH95959.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_322_26
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

30110..31849
DNA (1740bp) protein (580aa)
condensation domain-containing protein (EC:5.1.1.13)
Condensation domain protein {ECO:0000313|EMBL:ACC81846.1}; EC=5.1.1.13 {ECO:0000313|EMBL:ACC81846.1};; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc p
Condensation domain protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J0Z5_NOSP7
scnpilot_expt_750_bf_scaffold_322_27
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31899..35441
DNA (3543bp) protein (1181aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000373F511 rbh
amino acid adenylation enzyme/thioester reductase family protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_322_28
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35413..36039
DNA (627bp) protein (209aa)
Putative leucyldemethylblasticidin S guanidino methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJN5_9PROT
Putative leucyldemethylblasticidin S guanidino methyltransferase {ECO:0000313|EMBL:CCU62994.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae
putative multi-domain non-ribosomal peptide synthetase
scnpilot_expt_750_bf_scaffold_322_29
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36224..36853
DNA (630bp) protein (210aa)
CheW protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKD9_9PROT
Chemotaxis protein CheW {ECO:0000313|EMBL:KIO48625.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
cheW40H-4; scaffold protein CheW associated with MCPs of class 40H
Displaying items 1-30 of 186 in total

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