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scnpilot_expt_750_bf_scaffold_546

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_546_1
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

212..3979
DNA (3768bp) protein (1256aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GL22_NITSI rbh
Uncharacterized protein {ECO:0000313|EMBL:AEJ01795.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_546_2
unknown

Not on your lists

4722..4898
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_546_3
Enterobacteria phage RB3, T4likevirus, Caudovirales, Viruses

Not on your lists

4891..5220
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:AIT73534.1}; TaxID=69610 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Enterobacteria phage RB
scnpilot_expt_750_bf_scaffold_546_4
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5226..5456
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WWF1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KGM57402.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenici
putative type III restriction enzyme, res subunit
scnpilot_expt_750_bf_scaffold_546_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5549..6916)
DNA (1368bp) protein (456aa)
Putative cytochrome c1 signal peptide protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBE6_NITMU rbh
putative cytochrome c1 signal peptide protein rbh
Putative cytochrome c1 signal peptide protein {ECO:0000313|EMBL:ABB73925.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae;
scnpilot_expt_750_bf_scaffold_546_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7387..7908
DNA (522bp) protein (174aa)
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI0003720BD4
Membrane protein {ECO:0000313|EMBL:KIO49851.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_546_7
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8413..10179
DNA (1767bp) protein (589aa)
Phospholipase A2 family protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PUV2_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH39551.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas comm
phospholipase A2 family protein
scnpilot_expt_750_bf_scaffold_546_8
unknown

Not on your lists

comp(10072..10302)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_546_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10299..11267)
DNA (969bp) protein (323aa)
Isoaspartyl aminopeptidase @ Asp-X dipeptidase {ECO:0000313|EMBL:CCU63366.1}; EC=3.4.19.5 {ECO:0000313|EMBL:CCU63366.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomo
Isoaspartyl aminopeptidase @ Asp-X dipeptidase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ07_9PROT rbh
peptidase T2 asparaginase 2
scnpilot_expt_750_bf_scaffold_546_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11523..12446
DNA (924bp) protein (308aa)
Universal stress protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK42_9PROT rbh
Universal stress protein {ECO:0000313|EMBL:CCU62913.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira l
hypothetical protein
scnpilot_expt_750_bf_scaffold_546_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12507..12977)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y716_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75455.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
scnpilot_expt_750_bf_scaffold_546_12
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13303..14730
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PS62_9RHOO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL24001.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
scnpilot_expt_750_bf_scaffold_546_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15221..16375
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH42_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU61742.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
scnpilot_expt_750_bf_scaffold_546_14
unknown

Not on your lists

comp(16532..16660)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_546_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16693..17079)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVK5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63365.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
scnpilot_expt_750_bf_scaffold_546_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17116..19227)
DNA (2112bp) protein (704aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKH5_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU63364.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
scnpilot_expt_750_bf_scaffold_546_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19406..22609)
DNA (3204bp) protein (1068aa)
Acriflavin resistance protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Y4_NITMU rbh
Acriflavin resistance protein {ECO:0000313|EMBL:KIO47877.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospir
acriflavin resistance protein
scnpilot_expt_750_bf_scaffold_546_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22686..23918)
DNA (1233bp) protein (411aa)
Secretion protein HlyD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Y5_NITMU rbh
Secretion protein HlyD {ECO:0000313|EMBL:KIO47876.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. N
secretion protein HlyD
scnpilot_expt_750_bf_scaffold_546_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23932..25308)
DNA (1377bp) protein (459aa)
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Y6_NITMU rbh
Transporter {ECO:0000313|EMBL:KIO47875.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
RND efflux system outer membrane lipoprotein NodT
scnpilot_expt_750_bf_scaffold_546_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25813..26325
DNA (513bp) protein (171aa)
Sigma-24 (FecI-like) n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Y7_NITMU
Extracytoplasmic-function sigma-70 factor {ECO:0000313|EMBL:KIO47872.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source=
extracytoplasmic-function sigma-70 factor
scnpilot_expt_750_bf_scaffold_546_21
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26759..27481)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCP6_NITMU rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO47871.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_546_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27702..27932
DNA (231bp) protein (77aa)
MbtH-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Y9_NITMU
MbtH-like protein
Antibiotic synthesis protein MbtH {ECO:0000313|EMBL:KIO47870.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitroso
scnpilot_expt_750_bf_scaffold_546_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27932..28708
DNA (777bp) protein (259aa)
Thioesterase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Z0_NITMU rbh
Thioesterase {ECO:0000313|EMBL:KIO47869.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
thioesterase
scnpilot_expt_750_bf_scaffold_546_24
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28989..34298
DNA (5310bp) protein (1770aa)
Amino acid adenylation n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Z2_NITMU rbh
Thioester reductase {ECO:0000313|EMBL:KIO47868.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV
amino acid adenylation
scnpilot_expt_750_bf_scaffold_546_25
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34298..38947
DNA (4650bp) protein (1550aa)
Beta-ketoacyl synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Z3_NITMU rbh
Polyketide synthase {ECO:0000313|EMBL:KIO47867.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV
beta-ketoacyl synthase
Displaying 25 items

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