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scnpilot_expt_750_bf_scaffold_564

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_564_1
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(153..887)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UXT9_TERSS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV83105.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA
scnpilot_expt_750_bf_scaffold_564_2
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(891..2444)
DNA (1554bp) protein (518aa)
Tyrosinase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UXU0_TERSS rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF21134.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
tyrosinase
scnpilot_expt_750_bf_scaffold_564_3
unknown

Not on your lists

comp(2612..2833)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_564_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3132..4796
DNA (1665bp) protein (555aa)
ABC transporter related n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH68_9PROT rbh
ABC transporter related {ECO:0000313|EMBL:CCU61787.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
putative ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_564_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4875..5192)
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO48602.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
scnpilot_expt_750_bf_scaffold_564_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5455..6309
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQU8_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU61790.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
scnpilot_expt_750_bf_scaffold_564_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6384..7634)
DNA (1251bp) protein (417aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFC5_9PROT rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
scnpilot_expt_750_bf_scaffold_564_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8049..8438
DNA (390bp) protein (130aa)
YjgF-like protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH70_9PROT
YjgF-like protein {ECO:0000313|EMBL:CCU61792.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
endoribonuclease L-PSP
scnpilot_expt_750_bf_scaffold_564_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8435..10552
DNA (2118bp) protein (706aa)
ATP-dependent DNA helicase RecG n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHH5_9PROT rbh
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CCU61793.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitroso
ATP-dependent DNA helicase RecG
scnpilot_expt_750_bf_scaffold_564_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10640..11422
DNA (783bp) protein (261aa)
ABC transporter related n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQV1_9PROT rbh
ABC transporter related {ECO:0000313|EMBL:CCU61795.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
ABC transporter-like protein
scnpilot_expt_750_bf_scaffold_564_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11558..12961
DNA (1404bp) protein (468aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1288494 species="Bacteria; Proteobacteria;
Poly(A) polymerase I n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFC6_9PROT rbh
poly(A) polymerase
scnpilot_expt_750_bf_scaffold_564_12
unknown

Not on your lists

comp(13217..13417)
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_564_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13478..14119
DNA (642bp) protein (214aa)
Deoxyadenosine kinase / Deoxyguanosine kinase {ECO:0000313|EMBL:CCU61798.1}; EC=2.7.1.113 {ECO:0000313|EMBL:CCU61798.1};; EC=2.7.1.76 {ECO:0000313|EMBL:CCU61798.1};; TaxID=1288494 species="Bacteria; P
Deoxyadenosine kinase / Deoxyguanosine kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHH7_9PROT
deoxynucleoside kinase
scnpilot_expt_750_bf_scaffold_564_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14276..15067
DNA (792bp) protein (264aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH21_9PROT rbh
scnpilot_expt_750_bf_scaffold_564_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15092..15916
DNA (825bp) protein (275aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000255|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000255|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000255|HAMAP-
Pantothenate synthetase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=PANC_NITMU rbh
scnpilot_expt_750_bf_scaffold_564_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16165..17037
DNA (873bp) protein (291aa)
Transcriptional regulator-related protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAP2_NITMU rbh
transcriptional regulator-like protein
Transcriptional regulator-related protein {ECO:0000313|EMBL:ABB74179.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source
scnpilot_expt_750_bf_scaffold_564_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17074..19902)
DNA (2829bp) protein (943aa)
Aconitate hydratase @ 2-methylisocitrate dehydratase {ECO:0000313|EMBL:CCU61804.1}; EC=4.2.1.3 {ECO:0000313|EMBL:CCU61804.1};; EC=4.2.1.99 {ECO:0000313|EMBL:CCU61804.1};; TaxID=1288494 species="Bacter
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase @ 2-methylisocitrate dehydratase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH24_9PROT rbh
scnpilot_expt_750_bf_scaffold_564_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20130..20888)
DNA (759bp) protein (253aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CCU61806.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CCU61806.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonad
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFC8_9PROT rbh
short chain dehydrogenase
scnpilot_expt_750_bf_scaffold_564_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21312..21965
DNA (654bp) protein (218aa)
Esterase/lipase/thioesterase family active site protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAP5_NITMU
Thioesterase {ECO:0000313|EMBL:KIO48633.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
esterase/lipase/thioesterase family protein
scnpilot_expt_750_bf_scaffold_564_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21952..23340
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH26_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU61809.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
scnpilot_expt_750_bf_scaffold_564_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23645..25105)
DNA (1461bp) protein (487aa)
2-methylcitrate dehydratase {ECO:0000313|EMBL:CCU61810.1}; EC=4.2.1.79 {ECO:0000313|EMBL:CCU61810.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomon
prpD; 2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQW4_9PROT rbh
scnpilot_expt_750_bf_scaffold_564_22
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25177..25542)
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3J710_NITOC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI18125.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C
scnpilot_expt_750_bf_scaffold_564_23
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25978..29007
DNA (3030bp) protein (1010aa)
Ankyrin n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVL2_ACCPU rbh
ankyrin Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ankyrin
scnpilot_expt_750_bf_scaffold_564_24
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29121..30290)
DNA (1170bp) protein (390aa)
methylcitrate synthase (EC:2.3.3.5)
Citrate synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ71_9PROT rbh
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;
scnpilot_expt_750_bf_scaffold_564_25
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30277..31185)
DNA (909bp) protein (303aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomona
prpB; 2-methylisocitrate lyase (EC:4.1.3.30)
Methylisocitrate lyase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIT2_9PROT rbh
scnpilot_expt_750_bf_scaffold_564_26
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31218..32201)
DNA (984bp) protein (328aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=1288494 species="Bacteria; P
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGY1_9PROT rbh
scnpilot_expt_750_bf_scaffold_564_27
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32706..33083
DNA (378bp) protein (126aa)
Succinate dehydrogenase cytochrome b-556 subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ66_9PROT
Succinate dehydrogenase {ECO:0000313|EMBL:KIO48583.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
succinate dehydrogenase, cytochrome b subunit
scnpilot_expt_750_bf_scaffold_564_28
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33077..33439
DNA (363bp) protein (121aa)
Succinate dehydrogenase hydrophobic membrane anchor protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIS8_9PROT
Succinate dehydrogenase hydrophobic membrane anchor protein {ECO:0000313|EMBL:CCU62542.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nit
succinate dehydrogenase, cytochrome b subunit
scnpilot_expt_750_bf_scaffold_564_29
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33430..35193
DNA (1764bp) protein (588aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosom
succinate dehydrogenase, flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGX8_9PROT rbh
scnpilot_expt_750_bf_scaffold_564_30
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35431..36939
DNA (1509bp) protein (503aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DT10_9PROT rbh
Displaying items 1-30 of 54 in total

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