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scnpilot_expt_750_bf_scaffold_147

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Displaying items 1-30 of 346 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_147_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(448..1299)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML80_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK89970.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_147_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1324..3159)
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML81_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK89971.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_147_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3185..4117)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML82_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK89972.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
uncharacterized protein
scnpilot_expt_750_bf_scaffold_147_4
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4121..4462)
DNA (342bp) protein (114aa)
Transcriptional regulator, XRE family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MH37_ACIET
XRE family transcriptional regulator Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
XRE family transcriptional regulator
scnpilot_expt_750_bf_scaffold_147_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4698..5933
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML84_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK89974.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_147_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5938..6900
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F4A54 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD22598.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
putative uncharacterized protein
scnpilot_expt_750_bf_scaffold_147_7
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6974..7204
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0001693B2C
Uncharacterized protein {ECO:0000313|EMBL:AJQ87349.1}; TaxID=129394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae
hypothetical protein
scnpilot_expt_750_bf_scaffold_147_trna_3
unknown

Not on your lists

comp(7502..7574)
DNA (73bp)
transferRNA
scnpilot_expt_750_bf_scaffold_147_8
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7618..8538)
DNA (921bp) protein (307aa)
Transcriptional regulator CysB-like protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0FJR2_9BURK
cysB; cys regulon transcription regulator protein
Transcriptional regulator CysB-like protein {ECO:0000313|EMBL:EOA02098.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" sour
scnpilot_expt_750_bf_scaffold_147_9
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8542..10179)
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKN5_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP49582.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_expt_750_bf_scaffold_147_10
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10329..11462)
DNA (1134bp) protein (378aa)
Permease, YjgP/YjgQ family n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RXH3_9BURK rbh
Permease, YjgP/YjgQ family {ECO:0000313|EMBL:EFV94969.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabili
permease
scnpilot_expt_750_bf_scaffold_147_11
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11476..12567)
DNA (1092bp) protein (364aa)
Permease, YjgP/YjgQ family n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RXH4_9BURK rbh
Permease, YjgP/YjgQ family {ECO:0000313|EMBL:EFV94970.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabili
putative permease
scnpilot_expt_750_bf_scaffold_147_12
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12630..14111
DNA (1482bp) protein (494aa)
pepA; leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000255|HAMAP-Rule:MF_00181};; Leucine aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; Short=LAP {ECO:0000255|HAMA
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034BD828 rbh
scnpilot_expt_750_bf_scaffold_147_13
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14115..14537
DNA (423bp) protein (141aa)
holC; DNA polymerase III chi subunit (EC:2.7.7.7)
DNA polymerase III subunit chi n=1 Tax=Ralstonia sp. AU12-08 RepID=S9RT68_9RALS
DNA polymerase III subunit chi {ECO:0000313|EMBL:EPX96911.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp.
scnpilot_expt_750_bf_scaffold_147_14
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14534..14956
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RXH7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFV94973.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis A
scnpilot_expt_750_bf_scaffold_147_15
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15016..18132
DNA (3117bp) protein (1039aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; Valine--tRNA ligase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=blood disease bacterium R229 RepID=G2ZKF6_9RALS
scnpilot_expt_750_bf_scaffold_147_16
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18137..19165)
DNA (1029bp) protein (343aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKJ3_9BURK rbh
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EHR72460.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
TRAP C4-dicarboxylate transport system permease subunit DctP
scnpilot_expt_750_bf_scaffold_147_17
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19193..20515)
DNA (1323bp) protein (441aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Acidovorax sp. KKS102 RepID=K0HT03_9BURK rbh
TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:KDB51075.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.
TRAP dicarboxylate transporter subunit DctM
scnpilot_expt_750_bf_scaffold_147_18
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20512..21030)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HLD6_9BURK
TRAP-type mannitol/chloroaromatic compound transport system, small permease component {ECO:0000313|EMBL:KDB51074.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
hypothetical protein
scnpilot_expt_750_bf_scaffold_147_19
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21027..22451)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037943D1 rbh
MmgE/PrpD family protein rbh
MmgE/PrpD family protein {ECO:0000313|EMBL:AFT86042.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phe
scnpilot_expt_750_bf_scaffold_147_20
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22448..23890)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KB35_HALHC rbh
mutL; glutamate mutase, mutL Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_147_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23890..24330)
DNA (441bp) protein (147aa)
mutS; methylaspartate mutase subunit S (EC:5.4.99.1); K01846 methylaspartate mutase [EC:5.4.99.1] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
glutamate mutase subunit S (EC:5.4.99.1)
Methylaspartate mutase S chain n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RT97_9CLOT
scnpilot_expt_750_bf_scaffold_147_22
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24327..25790)
DNA (1464bp) protein (488aa)
methylaspartate mutase subunit E; K01846 methylaspartate mutase [EC:5.4.99.1] Tax=RBG_16_Actinobacteria_64_13_curated
Methylaspartate mutase E chain n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYS6_9FIRM
hypothetical protein
scnpilot_expt_750_bf_scaffold_147_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26020..27183
DNA (1164bp) protein (388aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07JW6_RHOP5
major facilitator transporter Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
major facilitator transporter
scnpilot_expt_750_bf_scaffold_147_24
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27250..28104)
DNA (855bp) protein (285aa)
LuxR family transcriptional regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A6T0_9PROT
LuxR family transcriptional regulator {ECO:0000313|EMBL:EME68513.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" sour
LuxR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_147_25
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28101..29552)
DNA (1452bp) protein (484aa)
methylaspartate mutase subunit E; K01846 methylaspartate mutase [EC:5.4.99.1] Tax=RBG_16_Actinobacteria_64_13_curated
Methylaspartate mutase, E subunit n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RV58_9CLOT
hypothetical protein
scnpilot_expt_750_bf_scaffold_147_26
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29770..30579)
DNA (810bp) protein (270aa)
Transcriptional regulator n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X8L5_9PSEU
IclR family transcriptional regulator; K05818 IclR family transcriptional regulator, mhp operon transcriptional activator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
IclR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_147_27
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30853..31332
DNA (480bp) protein (160aa)
Biotin carboxyl carrier protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM72_9SPHN
biotin carboxyl carrier protein
Biotin carboxyl carrier protein {ECO:0000313|EMBL:BAK65327.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
scnpilot_expt_750_bf_scaffold_147_28
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31329..32735
DNA (1407bp) protein (469aa)
biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Biotin carboxylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM71_9SPHN rbh
biotin carboxylase
scnpilot_expt_750_bf_scaffold_147_29
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32732..34228
DNA (1497bp) protein (499aa)
Putative carboxylase subunit of acetyl-CoA carboxylase-like enzyme n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8S3_AROAE
Strain MEJ076 contig_21, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ00357.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
xccA; carboxylase subunit of acetyl-CoA carboxylase-like enzyme
Displaying items 1-30 of 346 in total

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