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scnpilot_expt_750_bf_scaffold_363

Search features with annotation key words

Displaying items 61-90 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_363_60
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64032..64730)
DNA (699bp) protein (233aa)
Response regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AMR9_9PROT
response regulator
Response regulator {ECO:0000313|EMBL:BAN36114.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrifi
scnpilot_expt_750_bf_scaffold_363_61
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64955..65623)
DNA (669bp) protein (223aa)
SNARE-like domain protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RXX5_9BURK rbh
SNARE-like domain protein {ECO:0000313|EMBL:EFV94799.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis
hypothetical protein
scnpilot_expt_750_bf_scaffold_363_62
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65632..67641
DNA (2010bp) protein (670aa)
DNA mismatch repair protein MutL n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WZ57_9BURK
mutL; DNA mismatch repair protein
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae;
scnpilot_expt_750_bf_scaffold_363_63
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67641..68873
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003690E7A
transporter
bssH; transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
scnpilot_expt_750_bf_scaffold_363_64
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68870..69850
DNA (981bp) protein (327aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA delta(2)-isopentenylpyrophosphate transferase n=2 Tax=Pandoraea RepID=V5UDA5_9BURK rbh
scnpilot_expt_750_bf_scaffold_363_65
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69893..73858)
DNA (3966bp) protein (1322aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003668456
Uncharacterized protein {ECO:0000313|EMBL:EEG10072.1}; Flags: Precursor;; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" so
hypothetical protein
scnpilot_expt_750_bf_scaffold_363_66
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73858..75681)
DNA (1824bp) protein (608aa)
Outer membrane protein, OMP85 family n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZ56_9BURK rbh
Outer membrane protein, OMP85 family {ECO:0000313|EMBL:EFV93855.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropi
Surface antigen
scnpilot_expt_750_bf_scaffold_363_67
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75695..76756)
DNA (1062bp) protein (354aa)
purM; phosphoribosylaminoimidazole synthetase (AIR synthetase) (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=2 Tax=Ralstonia RepID=D8NYX0_RALSL rbh
scnpilot_expt_750_bf_scaffold_363_68
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76912..77979
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0G6_LEPCP rbh
Putative permease often clustered with de novo purine synthesis
Putative permease often clustered with de novo purine synthesis {ECO:0000313|EMBL:AIY43547.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Co
scnpilot_expt_750_bf_scaffold_363_69
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78036..78719
DNA (684bp) protein (228aa)
DnaA regulatory inactivator Hda n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2ICH7_9BURK
DnaA regulatory inactivator Hda {ECO:0000313|EMBL:EIF28429.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholder
DnaA regulatory inactivator Hda
scnpilot_expt_750_bf_scaffold_363_70
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78716..79420
DNA (705bp) protein (235aa)
Had-superfamily subfamily ib, pspase-like protein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6FYU5_RALS8
had-superfamily subfamily ib, pspase-like; protein
Had-superfamily subfamily ib, pspase-like protein {ECO:0000313|EMBL:AEG68178.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" so
scnpilot_expt_750_bf_scaffold_363_71
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79417..80901
DNA (1485bp) protein (495aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1469502 species="Bacteria; Proteobacteria;
Poly(A) polymerase I n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IYI8_HERSS rbh
poly(A) polymerase
scnpilot_expt_750_bf_scaffold_363_72
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80910..81428
DNA (519bp) protein (173aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:EWS59389.1}; EC=2.7.6.3 {ECO:0000313|EMBL:EWS59389.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaprote
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SK83_METPP
scnpilot_expt_750_bf_scaffold_363_73
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81425..81772
DNA (348bp) protein (116aa)
membrane protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI000315C7BC
Uncharacterized protein {ECO:0000313|EMBL:EJL86714.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" sour
hypothetical protein
scnpilot_expt_750_bf_scaffold_363_74
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81769..82434
DNA (666bp) protein (222aa)
deoxynucleoside kinase (EC:2.7.1.76); K10353 deoxyadenosine kinase [EC:2.7.1.76] Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
deoxynucleoside kinase (EC:2.7.1.76)
Deoxyadenosine kinase n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W3V4_9BURK rbh
scnpilot_expt_750_bf_scaffold_363_75
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82442..83287
DNA (846bp) protein (282aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] Tax=CG_Rhodof_04
pantoate--beta-alanine ligase n=1 Tax=Variovorax paradoxus RepID=UPI0003728D1E
scnpilot_expt_750_bf_scaffold_363_76
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83363..84151)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCA2_ACISJ
hypothetical protein Tax=RBG_16_Betaproteobacteria_58_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_363_77
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84417..85136)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82X48_NITEU rbh
DNA-3-methyladenine glycosylase I
Uncharacterized protein {ECO:0000313|EMBL:CAD84358.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eur
scnpilot_expt_750_bf_scaffold_363_78
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85309..85656)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MU97_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_363_79
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85619..85933)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1N3_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34587.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
scnpilot_expt_750_bf_scaffold_363_80
unknown

Not on your lists

85996..86787
DNA (792bp) protein (264aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_363_81
R_WOR_2_50_17, WOR-2, Bacteria

Not on your lists

comp(86659..88110)
DNA (1452bp) protein (484aa)
DNA topoisomerase type IA zn finger domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NW93_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_50_17_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_363_82
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88179..88484
DNA (306bp) protein (102aa)
Transposition helper protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YM96_9RHOO
Transposition helper protein {ECO:0000313|EMBL:ENO83477.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis
istB-like ATP binding family protein
scnpilot_expt_750_bf_scaffold_363_83
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(88678..89430)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WZQ3_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD56957.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_expt_750_bf_scaffold_363_84
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90090..90596)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82T32_NITEU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD86010.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eur
scnpilot_expt_750_bf_scaffold_363_85
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90618..91034)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82T31_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD86011.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eur
scnpilot_expt_750_bf_scaffold_363_86
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91438..91758
DNA (321bp) protein (107aa)
Transposase IS401 n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XS97_9RALS
Uncharacterized protein {ECO:0000313|EMBL:CEH92344.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri
transposase IS401
scnpilot_expt_750_bf_scaffold_363_87
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91911..92660
DNA (750bp) protein (250aa)
Transposase n=1 Tax=Janthinobacterium sp. (strain J3) RepID=Q84IJ7_JANS3
Transposase {ECO:0000313|EMBL:EYS85063.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
integrase catalytic subunit
scnpilot_expt_750_bf_scaffold_363_88
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93531..94580)
DNA (1050bp) protein (350aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EGV17799.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EGV17799.1};; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thio
UDP-glucose 4-epimerase n=1 Tax=Thiocapsa marina 5811 RepID=F9UD55_9GAMM
UDP-glucose 4-epimerase
scnpilot_expt_750_bf_scaffold_363_89
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94694..96121
DNA (1428bp) protein (476aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:2.7.7.22)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031CA131 rbh
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KHL11310.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
Displaying items 61-90 of 134 in total

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