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scnpilot_expt_750_bf_scaffold_363

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Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_363_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235..825
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HML4_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94251.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
scnpilot_expt_750_bf_scaffold_363_2
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(853..1908)
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NU60_CHRVO rbh
hypothetical protein
Esterase {ECO:0000313|EMBL:KJH65621.1}; TaxID=536 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum.;"
scnpilot_expt_750_bf_scaffold_363_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2040..3347)
DNA (1308bp) protein (436aa)
C4-dicarboxylate TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKG2_9BURK rbh
C4-dicarboxylate TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein {ECO:0000313|EMBL:EIK89702.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; B
TRAP-type C4-dicarboxylate transport system, large permease component
scnpilot_expt_750_bf_scaffold_363_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3347..3805)
DNA (459bp) protein (153aa)
Tripartite ATP-independent periplasmic transporter DctQ n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKG1_9BURK
tripartite ATP-independent periplasmic transporter DctQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
C4-dicarboxylate transporter, DctQ subunit
scnpilot_expt_750_bf_scaffold_363_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3848..4837)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKG0_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK89700.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
extracellular solute-binding protein, family 7 family protein 4
scnpilot_expt_750_bf_scaffold_363_6
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4859..5629)
DNA (771bp) protein (257aa)
Short-chain dehydrogenase reductase sdr n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKF9_9BURK
short-chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
short-chain dehydrogenase
scnpilot_expt_750_bf_scaffold_363_7
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5645..6619)
DNA (975bp) protein (325aa)
pyruvate dehydrogenase (EC:1.2.4.1)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030E1922 rbh
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
scnpilot_expt_750_bf_scaffold_363_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6621..7574)
DNA (954bp) protein (318aa)
acoA; acetoin dehydrogenase E1 subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
pyruvate dehydrogenase (EC:1.2.4.1)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030221E4
scnpilot_expt_750_bf_scaffold_363_9
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7587..7826)
DNA (240bp) protein (80aa)
sucB; Dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (EC:2.3.1.61); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
dihydrolipoamide succinyltransferase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037EFF80
sucB_odhB; 2-oxoglutarate dehydrogenase E2 component
scnpilot_expt_750_bf_scaffold_363_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7843..8592)
DNA (750bp) protein (250aa)
acoC; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system (EC:2.3.1.12) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000364764C
catalytic domain of components of various dehydrogenase complexes
scnpilot_expt_750_bf_scaffold_363_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8664..9215
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000382E54C
transcriptional regulator, MarR family Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
transcriptional regulator, MarR family
scnpilot_expt_750_bf_scaffold_363_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9148..10074)
DNA (927bp) protein (309aa)
Cys regulon transcriptional activator CysB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK41_9PROT
transcriptional regulator CysB-like protein; K13634 LysR family transcriptional regulator, cys regulon transcriptional activator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
transcriptional regulator CysB-like protein
scnpilot_expt_750_bf_scaffold_363_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10262..10579
DNA (318bp) protein (106aa)
id=3780581 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=3780581 Tax=GWC2_Rokubacteria_70_16_curated
scnpilot_expt_750_bf_scaffold_363_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10598..11167
DNA (570bp) protein (190aa)
Oxidoreductase n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HQT1_PSEST
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
nitroreductase family protein
scnpilot_expt_750_bf_scaffold_363_15
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11295..12269
DNA (975bp) protein (325aa)
Uncharacterized protein upf0065 n=2 Tax=Bordetella bronchiseptica RepID=K4T889_BORBO rbh
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KDD64722.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_363_16
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12431..13585
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLF4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAR23142.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
scnpilot_expt_750_bf_scaffold_363_trna_2
unknown

Not on your lists

comp(13603..13677)
DNA (75bp)
transferRNA
scnpilot_expt_750_bf_scaffold_363_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13731..14534)
DNA (804bp) protein (268aa)
Putative IclR-family regulatory protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NWG6_AROAE
iclR; IclR family regulatory protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
iclR; IclR family regulatory protein
scnpilot_expt_750_bf_scaffold_363_18
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14705..16108
DNA (1404bp) protein (468aa)
Glucose-inhibited division protein A id=3931052 bin=GWC2_Syntrophus__56_31 species=Nitratireductor pacificus genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + rbh
glucose-inhibited division protein A Tax=GWC2_Syntrophus_56_31_curated
glucose-inhibited division protein A
scnpilot_expt_750_bf_scaffold_363_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16171..17157
DNA (987bp) protein (329aa)
MFS transporter n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI0003710287
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_363_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17234..18178)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000380452C
putative transporter, EamA family protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_363_21
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18175..18387)
DNA (213bp) protein (71aa)
hypothetical protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
Uncharacterized protein id=1269118 bin=GWE1_Burkholderiales_65_30 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
scnpilot_expt_750_bf_scaffold_363_22
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18384..19136)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000374F2BA
integral membrane protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
integral membrane protein
scnpilot_expt_750_bf_scaffold_363_23
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19191..19877)
DNA (687bp) protein (229aa)
RNA polymerase sigma factor RpoD n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QHP5_BORBO
rpoD; RNA polymerase sigma factor RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=568706 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alc
scnpilot_expt_750_bf_scaffold_363_24
Sporothrix schenckii, Sporothrix, Ophiostomatales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

20264..20782
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183) RepID=U7PQ26_SPOS1
Uncharacterized protein {ECO:0000313|EMBL:ERS97026.1}; TaxID=1391915 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomatace
scnpilot_expt_750_bf_scaffold_363_25
Boreogadus saida, Boreogadus, Gadiformes, Neopterygii, Chordata, Metazoa

Not on your lists

21161..21727
DNA (567bp) protein (189aa)
Antifreeze glycoprotein n=1 Tax=Boreogadus saida RepID=A4K455_BORSA
Antifreeze glycopeptide AFGP polyprotein {ECO:0000313|EMBL:AAC60129.1}; Flags: Precursor;; TaxID=44932 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopte
hypothetical protein
scnpilot_expt_750_bf_scaffold_363_26
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21866..23686)
DNA (1821bp) protein (607aa)
DNA primase (EC:2.7.7.-)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=279058 species="Bacteria; Proteobacter
DNA primase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AIS5_COLFT rbh
scnpilot_expt_750_bf_scaffold_363_27
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23689..24138)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WEU0_BURSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG19215.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (
scnpilot_expt_750_bf_scaffold_363_28
Sutterella wadsworthensis, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24242..24454)
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=5 Tax=Sutterella RepID=E7H432_9BURK
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1203554 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutter
30S ribosomal protein S21
scnpilot_expt_750_bf_scaffold_363_29
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24649..25665
DNA (1017bp) protein (339aa)
putative nucleoside-triphosphatase; K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_16_Betaproteobacteria_66_20_curated
AAA ATPase central domain protein n=1 Tax=Burkholderia sp. H160 RepID=B5WMD9_9BURK rbh
ATPase AAA
Displaying items 1-30 of 134 in total

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