ggKbase home page

scnpilot_expt_750_bf_scaffold_375

Search features with annotation key words

Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_375_1
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163..1845
DNA (1683bp) protein (561aa)
AMP-dependent synthetase and ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VK7_RHOFD rbh
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABD70196.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax
scnpilot_expt_750_bf_scaffold_375_2
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1836..3593
DNA (1758bp) protein (586aa)
Thiamine pyrophosphate enzyme-like TPP binding protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VK8_RHOFD rbh
thiamine pyrophosphate enzyme-like protein
Thiamine pyrophosphate enzyme-like TPP binding protein {ECO:0000313|EMBL:ABD70195.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;"
scnpilot_expt_750_bf_scaffold_375_3
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3679..5307
DNA (1629bp) protein (543aa)
Adenylate cyclase (EC:4.6.1.1)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVX9_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHR69835.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
scnpilot_expt_750_bf_scaffold_375_4
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5311..5868)
DNA (558bp) protein (186aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderia
Diacylglycerol kinase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2J9N5_9BURK
folA; dihydrofolate reductase
scnpilot_expt_750_bf_scaffold_375_5
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6059..6454)
DNA (396bp) protein (132aa)
Putative translation initiation inhibitor n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W5C3_MAGSA
putative translation initiation inhibitor Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
putative translation initiation inhibitor
scnpilot_expt_750_bf_scaffold_375_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6490..7017)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TVC0_PHAFV
rubrerythrin Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
rubrerythrin
scnpilot_expt_750_bf_scaffold_375_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7014..7871)
DNA (858bp) protein (286aa)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
2-oxoglutarate synthase n=1 Tax=Azoarcus toluclasticus RepID=UPI0003699F2A rbh
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
scnpilot_expt_750_bf_scaffold_375_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7868..9655)
DNA (1788bp) protein (596aa)
2-oxoglutarate synthase, subunit alpha (EC:1.2.7.3); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit n=1 Tax=Azoarcus sp. KH32C RepID=H0PU91_9RHOO rbh
korA; 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit
scnpilot_expt_750_bf_scaffold_375_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9897..10964
DNA (1068bp) protein (356aa)
6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; K07538 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase [EC:1.1.1.-] Tax=CG_Rhodof_04
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000360F3F0 rbh
6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase
scnpilot_expt_750_bf_scaffold_375_10
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10978..12075
DNA (1098bp) protein (366aa)
6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; K07539 6-oxo-cyclohex-1-ene-carbonyl-CoA hydrolase [EC:3.7.1.-] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
Enoyl-CoA hydratase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UD90_9RHOB rbh
6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase
scnpilot_expt_750_bf_scaffold_375_11
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12079..12852
DNA (774bp) protein (258aa)
enoyl-CoA hydratase/isomerase; K07537 cyclohexa-1,5-dienecarbonyl-CoA hydratase [EC:4.2.1.100] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
Cyclohexa-1,5-dienecarbonyl-CoA hydratase id=4525408 bin=GWC2_Deltaproteobacteria_66_88 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria rbh
bamR; cyclohexa-1,5-dienecarbonyl-CoA hydratase
scnpilot_expt_750_bf_scaffold_375_12
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12852..14030
DNA (1179bp) protein (393aa)
benzoyl-CoA reductase subunit C (EC:1.3.7.8); K04112 benzoyl-CoA reductase subunit [EC:1.3.7.8] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
benzoyl-CoA reductase subunit C (EC:1.3.7.8)
Benzoyl-CoA reductase, subunit C n=2 Tax=Thauera RepID=C4KAX4_THASP rbh
scnpilot_expt_750_bf_scaffold_375_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14027..15343
DNA (1317bp) protein (439aa)
benzoyl-CoA reductase subunit B (EC:1.3.7.8); K04113 benzoyl-CoA reductase subunit [EC:1.3.7.8] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
benzoyl-CoA reductase subunit B (EC:1.3.7.8)
Benzoyl-CoA reductase, subunit B n=2 Tax=Thauera RepID=C4KAX3_THASP rbh
scnpilot_expt_750_bf_scaffold_375_14
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15355..16698
DNA (1344bp) protein (448aa)
2-hydroxyglutaryl-CoA dehydratase activator protein; K04114 benzoyl-CoA reductase subunit [EC:1.3.7.8] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Benzoyl-CoA reductase subunit A n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZRJ1_9PROT rbh
2-hydroxyglutaryl-CoA dehydratase activator protein
scnpilot_expt_750_bf_scaffold_375_15
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16726..17565
DNA (840bp) protein (280aa)
benzoyl-CoA reductase subunit D (EC:1.3.7.8); K04115 benzoyl-CoA reductase subunit [EC:1.3.7.8] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
benzoyl-CoA reductase subunit D (EC:1.3.7.8)
Benzoyl-CoA reductase subunit D n=2 Tax=Thauera aromatica RepID=BCRD_THAAR rbh
scnpilot_expt_750_bf_scaffold_375_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17599..17844
DNA (246bp) protein (82aa)
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21AJ7_RHOPB
4Fe-4S ferredoxin Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
4Fe-4S ferredoxin
scnpilot_expt_750_bf_scaffold_375_17
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18143..19099
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFJ2_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM94331.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
scnpilot_expt_750_bf_scaffold_375_18
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19096..21774
DNA (2679bp) protein (893aa)
N-acetyltransferase {ECO:0000313|EMBL:ABC22604.1}; EC=6.2.1.5 {ECO:0000313|EMBL:ABC22604.1};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae;
N-acetyltransferase n=2 Tax=Rhodospirillum rubrum RepID=Q2RTE1_RHORT rbh
N-acetyltransferase
scnpilot_expt_750_bf_scaffold_375_19
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21822..22736)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI92_METPP rbh
Aspartyl/Asparaginyl beta-hydroxylase {ECO:0000313|EMBL:EWS58917.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.
hypothetical protein
scnpilot_expt_750_bf_scaffold_375_20
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22867..24021)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F25D6 rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_375_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24102..24410)
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=Thauera RepID=N6YK51_9RHOO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_375_22
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24435..25448)
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W5C2_MAGSA
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_375_23
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25479..25973)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N834_RHOPA
hemerythrin HHE cation binding domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_375_24
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26056..27387)
DNA (1332bp) protein (444aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VC70_RHOPX rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_375_25
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27384..27674)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FP89_PHAMO
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_375_26
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27688..29040)
DNA (1353bp) protein (451aa)
phenylacetate--CoA ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=RBG_16_Betaproteobacteria_66_20_curated
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate-CoA ligase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07SZ7_RHOP5 rbh
scnpilot_expt_750_bf_scaffold_375_27
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29071..29928)
DNA (858bp) protein (286aa)
Conserved hypothetical phenylacetyl-CoA:acceptor oxidoreductase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K6W0_AZOSB
padD; phenylacetyl-CoA:acceptor oxidoreductase; K07308 anaerobic dimethyl sulfoxide reductase subunit C (DMSO reductase anchor subunit) Tax=CG_Rhodof_04
padD; phenylacetyl-CoA:acceptor oxidoreductase
scnpilot_expt_750_bf_scaffold_375_28
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29939..30589)
DNA (651bp) protein (217aa)
phenylacetyl-CoA:acceptor oxidoreductase n=1 Tax=Azoarcus toluclasticus RepID=UPI00037959D3
padC; phenylacetyl-CoA:acceptor oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
padC; phenylacetyl-CoA:acceptor oxidoreductase
scnpilot_expt_750_bf_scaffold_375_29
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30586..33351)
DNA (2766bp) protein (922aa)
Molybdopterin oxidoreductase n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KAY2_THASP rbh
molybdopterin oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
molybdopterin oxidoreductase
scnpilot_expt_750_bf_scaffold_375_30
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33351..33755)
DNA (405bp) protein (135aa)
Thioesterase n=1 Tax=Azoarcus sp. KH32C RepID=H0PU76_9RHOO
thioesterase Tax=RBG_16_Betaproteobacteria_66_20_curated
thioesterase
Displaying items 1-30 of 139 in total

View Taxonomy