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scnpilot_expt_750_bf_scaffold_892

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_892_1
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1..171)
DNA (171bp) protein (57aa)
Sbm5; methylmalonyl-CoA mutase N-terminal domain-containing protein; K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037D6ACF
scnpilot_expt_750_bf_scaffold_892_2
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

521..739
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2R6_LEPCP
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAP89825.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
scnpilot_expt_750_bf_scaffold_892_3
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(812..1513)
DNA (702bp) protein (234aa)
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XLU7_ALCXX rbh
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIR49714.1}; ABC transporter like protein {ECO:0000313|EMBL:EFV84840.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
scnpilot_expt_750_bf_scaffold_892_4
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1513..2262)
DNA (750bp) protein (250aa)
ABC transporter (EC:3.6.3.-)
ABC transporter family protein 90 {ECO:0000313|EMBL:ADP19197.1}; EC=3.6.3.- {ECO:0000313|EMBL:ADP19197.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalig
ABC transporter family protein 90 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJG5_ACHXA rbh
scnpilot_expt_750_bf_scaffold_892_5
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2255..3223)
DNA (969bp) protein (323aa)
Inner-membrane translocator 58 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJG4_ACHXA rbh
ABC transporter permease {ECO:0000313|EMBL:KGY27237.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosox
inner-membrane translocator
scnpilot_expt_750_bf_scaffold_892_6
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3231..4142)
DNA (912bp) protein (304aa)
ABC transporter permease n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037BC22D rbh
inner-membrane translocator
Inner-membrane translocator 57 {ECO:0000313|EMBL:ADP19195.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacte
scnpilot_expt_750_bf_scaffold_892_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4173..5342)
DNA (1170bp) protein (390aa)
Extracellular ligand-binding receptor n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=E5U8B1_ALCXX rbh
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIR49718.1}; Extracellular ligand-binding receptor {ECO:0000313|EMBL:EFV84824.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteo
scnpilot_expt_750_bf_scaffold_892_8
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5384..7063)
DNA (1680bp) protein (560aa)
AMP-dependent synthetase and ligase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZMI4_9PROT
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
AMP-dependent synthetase and ligase
scnpilot_expt_750_bf_scaffold_892_9
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7084..8541)
DNA (1458bp) protein (486aa)
NADH:flavin oxidoreductase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z4I3_9PROT rbh
NADH:flavin oxidoreductase {ECO:0000313|EMBL:EME69275.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magneto
NADH:flavin oxidoreductase
scnpilot_expt_750_bf_scaffold_892_10
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8653..10272)
DNA (1620bp) protein (540aa)
Crotonobetaine/carnitine-CoA ligase n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U1ZP20_9BURK rbh
Crotonobetaine/carnitine-CoA ligase {ECO:0000313|EMBL:ERI32811.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcalige
AMP-binding enzyme family protein
scnpilot_expt_750_bf_scaffold_892_11
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10273..11070)
DNA (798bp) protein (266aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003731DF9
short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:AGW91160.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia picketti
scnpilot_expt_750_bf_scaffold_892_12
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11212..11691)
DNA (480bp) protein (160aa)
Transcriptional regulator, MarR family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRE1_9PROT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFH10123.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Ros
marR family protein
scnpilot_expt_750_bf_scaffold_892_13
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11809..13011)
DNA (1203bp) protein (401aa)
Amidohydrolase n=1 Tax=Thauera phenylacetica B4P RepID=N6YV28_9RHOO
amidohydrolase Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
amidohydrolase
scnpilot_expt_750_bf_scaffold_892_14
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13017..13898)
DNA (882bp) protein (294aa)
dihydropteroate synthase DHPS; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=RBG_16_Betaproteobacteria_66_20_curated
Dihydropteroate synthase DHPS n=1 Tax=Thauera phenylacetica B4P RepID=N6ZUH0_9RHOO
dihydropteroate synthase DHPS
scnpilot_expt_750_bf_scaffold_892_15
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13895..15721)
DNA (1827bp) protein (609aa)
Ferredoxin (Fragment) n=1 Tax=Thauera phenylacetica B4P RepID=N6Y8Z4_9RHOO rbh
ferredoxin Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
ferredoxin
scnpilot_expt_750_bf_scaffold_892_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15733..16446)
DNA (714bp) protein (238aa)
Vitamin B12 dependent methionine synthase activation protein Tax=RBG_16_Betaproteobacteria_66_20_curated
Vitamin B12 dependent methionine synthase activation protein
Vitamin B12 dependent methionine synthase id=2272801 bin=GWB2_Chloroflexi_54_36 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
scnpilot_expt_750_bf_scaffold_892_17
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16475..16834)
DNA (360bp) protein (120aa)
Cobalamin B12-binding domain-containing protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZTZ7_9RHOO
Cobalamin B12-binding domain-containing protein {ECO:0000313|EMBL:ENO95619.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Th
B12 binding domain/Pterin binding enzyme
Displaying 17 items

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