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scnpilot_expt_750_bf_scaffold_897

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_897_1
Chitiniphilus shinanonensis, Chitiniphilus, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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3..101
DNA (99bp) protein (33aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=2 Tax=Chitiniphilus shinanonensis RepID=F8WSR3_9NEIS
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=553088 species="Bacteria; Proteobacteria; Betaproteobacteri
scnpilot_expt_750_bf_scaffold_897_trna_1
unknown

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117..189
DNA (73bp)
transferRNA
scnpilot_expt_750_bf_scaffold_897_2
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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216..599
DNA (384bp) protein (128aa)
Protein translocase subunit SecE n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X5C5_9BURK
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achrom
Preprotein translocase subunit SecE
scnpilot_expt_750_bf_scaffold_897_3
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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600..1133
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=2 Tax=Ralstonia RepID=D8NWL7_RALSL rbh
nusG; transcription termination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=741978 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
scnpilot_expt_750_bf_scaffold_897_4
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1226..1657
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=7 Tax=Burkholderia cepacia complex RepID=RL11_BURM1
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkh
scnpilot_expt_750_bf_scaffold_897_5
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1658..2368
DNA (711bp) protein (237aa)
50S ribosomal protein L1 n=1 Tax=Pusillimonas noertemannii RepID=UPI00031F6636
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter
rplA; 50S ribosomal protein L1
scnpilot_expt_750_bf_scaffold_897_6
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2704..3234
DNA (531bp) protein (177aa)
50S ribosomal protein L10 n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UHT5_ADVKW
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1036672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" sour
scnpilot_expt_750_bf_scaffold_897_7
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3289..3669
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZ08_9BURK
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mi
rplL; 50S ribosomal protein L7/L12
scnpilot_expt_750_bf_scaffold_897_8
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3879..8000
DNA (4122bp) protein (1374aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZ07_9BURK rbh
rpoB; DNA-directed RNA polymerase subunit beta
scnpilot_expt_750_bf_scaffold_897_9
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8038..12291
DNA (4254bp) protein (1418aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZ06_9BURK rbh
DNA-directed RNA polymerase subunit beta'
scnpilot_expt_750_bf_scaffold_897_10
unknown

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12318..13067
DNA (750bp) protein (250aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_897_11
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13175..13552
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=2 Tax=Rubrivivax RepID=I0HKY2_RUBGI
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" sourc
scnpilot_expt_750_bf_scaffold_897_12
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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13790..14260
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNY2_AZOSU
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (stra
scnpilot_expt_750_bf_scaffold_897_13
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14333..16438
DNA (2106bp) protein (702aa)
fusA2; elongation factor G (EC:3.6.5.3)
Elongation factor G n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZ15_9BURK rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiac
scnpilot_expt_750_bf_scaffold_897_14
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16478..16576
DNA (99bp) protein (33aa)
Elongation factor Tu n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJE3_ACCPU
tuf; elongation factor Tu
Elongation factor Tu {ECO:0000313|EMBL:EFV82215.1}; Flags: Fragment;; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achr
Displaying 15 items

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