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scnpilot_expt_750_bf_scaffold_364_6

Organism: SCNPILOT_EXPT_750_BF_Burkholderiales_68_35

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 5446..6855

Top 3 Functional Annotations

Value Algorithm Source
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 464.0
  • Bit_score: 793
  • Evalue 3.90e-227
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 464.0
  • Bit_score: 793
  • Evalue 1.90e-226
isopropylmalate isomerase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E474E7 similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 464.0
  • Bit_score: 799
  • Evalue 1.50e-228
  • rbh

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Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGTCCATCGCACCGCGCACGCTCTACGACAAGCTCTGGGATGCCCACGTCGTCCACCAGGAAGACGACGGCACCGCGCTCATCTACATCGACCGCCACCTGGTGCACGAAGTCACCAGCCCGCAGGCGTTCGAGGGGCTGAAGCTGGCCGGTCGCAAGCCGTGGCGGATCGCCGCCAACCTGGCGGTGGTCGACCACAACGTGCCCACCACCGACCGTTCGCACGGCATCGACGACCCGATTTCGCGCCTGCAGGTGGAGACGCTCGATGCCAATGCGCGCGAGCTCGGCATCCCCTATTTCGACATCAACGACCGCCGCCAGGGCATCGTGCACATCATCGGGCCGGAGCAGGGCGCCACCCTGCCGGGCATGACGGTGGTGTGCGGCGACTCCCACACCAGCACGCACGGCGCGTTCGGCTGCCTGGCCTTCGGCATCGGCACCTCCGAGGTCGAGCACGTGCTCGCCACGCAGACGCTGGTGGCGCGGAAGATGAAGAACATGCTGGTGCAGGTCGACGGCGCGCTGCCGGCCGGCGTCACCGCCAAGGACGTGGTGCTCGCCATCATCGGGCGCATCGGCACGGCGGGCGGCACCGGCTACGCCATCGAGTTCGGCGGCTCGACCATCCGCGCGCTGTCGATGGAAGGCCGCATGACCATCTGCAACATGGCCATCGAGGCGGGTGCGCGCGCCGGCATGATCGCGGTCGACGACACCACGCTGGGCTATCTGCGCGGGCGGCCGATGGCGCCGGCCGGTCTCGACTGGTACAAGGCGGTCGACCACTGGCGCACGCTGCGCTCCGATCCGCAGGCGCGTTTCGATCTGGTCGTCGAGCTCGATGCCACGCAGCTCAAGCCCCACGTCACCTGGGGTACCTCGCCCGAGATGGTGGTGGCGGTGGACGGGCGCGTGCCCGACCCCGACAAGGAAAAGGATCCGGTGCGCCGGGAAGGCATGGAGCGCGCCCTGCAGTACATGGGGCTCAAGCCCGATACGCCGATCACCGACATCCGCATCGACAAGGTGTTCATCGGCTCCTGCACCAACGCGCGCATCGAGGACCTGCGCGCGGCCGCGGCCGTGGTGCGCGGCAAGCACCGGGCCTCCAACGTGCGCCTGGCGATGGTCGTGCCGGGCTCGGGGCTGGTGAAGGCGCAGGCGGAGAAGGAAGGGCTCGACCGCATCTTCCGCGACGCCGGTTTCGAGTGGCGCGAGCCGGGGTGCTCGATGTGCCTGGCGATGAATGCCGACCGCCTCGAGCCGGGCGAGCGCTGCGCGTCGACCTCTAACCGCAATTTCGAGGGGCGCCAGGGCACCGGCGGGCGCACCCACCTGGTCAGTCCGGCGATGGCGGCTGCCGCGGCCGTCGCGGGGCATTTCGTCGACGTGCGGCGCATCTGA
PROTEIN sequence
Length: 470
MSIAPRTLYDKLWDAHVVHQEDDGTALIYIDRHLVHEVTSPQAFEGLKLAGRKPWRIAANLAVVDHNVPTTDRSHGIDDPISRLQVETLDANARELGIPYFDINDRRQGIVHIIGPEQGATLPGMTVVCGDSHTSTHGAFGCLAFGIGTSEVEHVLATQTLVARKMKNMLVQVDGALPAGVTAKDVVLAIIGRIGTAGGTGYAIEFGGSTIRALSMEGRMTICNMAIEAGARAGMIAVDDTTLGYLRGRPMAPAGLDWYKAVDHWRTLRSDPQARFDLVVELDATQLKPHVTWGTSPEMVVAVDGRVPDPDKEKDPVRREGMERALQYMGLKPDTPITDIRIDKVFIGSCTNARIEDLRAAAAVVRGKHRASNVRLAMVVPGSGLVKAQAEKEGLDRIFRDAGFEWREPGCSMCLAMNADRLEPGERCASTSNRNFEGRQGTGGRTHLVSPAMAAAAAVAGHFVDVRRI*