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scnpilot_expt_750_bf_scaffold_364_27

Organism: SCNPILOT_EXPT_750_BF_Burkholderiales_68_35

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(35157..35906)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B72AB4 similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 216.0
  • Bit_score: 167
  • Evalue 1.50e-38
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 230.0
  • Bit_score: 193
  • Evalue 7.20e-47
IclR family transcriptional regulator {ECO:0000313|EMBL:AHK05033.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 230.0
  • Bit_score: 193
  • Evalue 3.60e-46

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGGCAAGCAAAAAGATGAATACCCGGCGGGGCCGCCCCACCCTCCACGCGGTCGATACCCACTCGCAAGCCGGCACCGGCGCCGGCGAGCGTCTGCCGGTACGCGCCGTGCAACGCGCGTTCGACCTGCTGGCGCTGGTCGGCACGCAGCGCAACGGCACCACGCTGTCCGAGCTGGCGCGCGCCAGCGCCTTGCCGGTGAGCACCACCTCGCGCCTGATCGCCAGCCTCGAGCACGCCGGGTTCGTCGAACGCGACGCCGACGCGCGCTACCGGGCCGGCGCCCGCCTGCTGCAGGTCGGCCTGTCGGCGCTGCGCGGCTCGTCGCTGTACGAGCTGGCCGGGCCGTACCTGCGCGAGCTGTCCGACGCCAGCGGCGAGACGGCCAACCTGGCCGTGCGCATCGATGCCGACAACGCCATCTACCTGCGCCAGGTCATCAGCCCCAAGAGCATCCACCACTCCACCTGGCTGGGCATGATGCTGCCGCTGGACCGGACCTCGGCGGGCGCCGCGCTGCTCGGGCGCACCGGCGAAGCCGGCTATGCCGCGGCCCGCGGCACCCTCGAGCGCGACGTCACGGCAGTCGCCGCGCCGGTGCGCGACGCGAGCGGCGGCATCGTGGCCGCCTTCAGCATCACCGGCCCGACGTTCCGCATCGCCGACGACCTCCTTGCGCGCTTCGGCACCCTCGTGGTCGACGCGGCCCGACACGCCTCGATCCAGCTGGGCGCGCCGGCACGCCCCTGA
PROTEIN sequence
Length: 250
MASKKMNTRRGRPTLHAVDTHSQAGTGAGERLPVRAVQRAFDLLALVGTQRNGTTLSELARASALPVSTTSRLIASLEHAGFVERDADARYRAGARLLQVGLSALRGSSLYELAGPYLRELSDASGETANLAVRIDADNAIYLRQVISPKSIHHSTWLGMMLPLDRTSAGAALLGRTGEAGYAAARGTLERDVTAVAAPVRDASGGIVAAFSITGPTFRIADDLLARFGTLVVDAARHASIQLGAPARP*