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scnpilot_expt_750_bf_scaffold_1261

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1261_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)
integrase family protein Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_expt_750_bf_scaffold_1261_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

295..591
DNA (297bp) protein (99aa)
DNA-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D946B
histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=GWE1_Thiobacillus_62_9_curated
histone-like DNA-binding protein
scnpilot_expt_750_bf_scaffold_1261_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(900..1949)
DNA (1050bp) protein (350aa)
Membrane protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZAC8_9RHOO rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1261_4
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1954..2769)
DNA (816bp) protein (272aa)
cadmium-translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] Tax=GWA2_Gallionellales_54_124_curated
Cadmium-translocating P-type ATPase id=1341268 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cadmium-translocating P-type ATPase
scnpilot_expt_750_bf_scaffold_1261_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3176..3892
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036243FB
periplasmic protein TonB; K03832 periplasmic protein TonB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
periplasmic protein TonB
scnpilot_expt_750_bf_scaffold_1261_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3896..4651
DNA (756bp) protein (252aa)
flagellar motor protein MotA n=1 Tax=Thiobacillus denitrificans RepID=UPI000372CEAE
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
MotA/TolQ/ExbB proton channel family protein
scnpilot_expt_750_bf_scaffold_1261_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4651..5070
DNA (420bp) protein (140aa)
Putative biopolymer transport protein id=1317130 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=GWE1_Thiobacillus_62_9_curated
biopolymer transport protein
scnpilot_expt_750_bf_scaffold_1261_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5179..7287
DNA (2109bp) protein (703aa)
TonB-dependent siderophore receptor id=1317129 bin=GWE1_T_denit_62_9 species=Thioalkalimicrobium aerophilum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
TonB-dependent receptor, plug Tax=GWE1_Thiobacillus_62_9_curated
outer membrane iron(III) dicitrate receptor
scnpilot_expt_750_bf_scaffold_1261_9
unknown

Not on your lists

7347..7517
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1261_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7536..9875)
DNA (2340bp) protein (780aa)
cadmium-translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] Tax=GWE1_Thiobacillus_62_9_curated
Cadmium-translocating P-type ATPase id=1341268 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cadmium-translocating P-type ATPase
scnpilot_expt_750_bf_scaffold_1261_11
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9924..10232)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI7_GALCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL54963.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferr
scnpilot_expt_750_bf_scaffold_1261_12
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10373..13408)
DNA (3036bp) protein (1012aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI6_GALCS
CzcA family heavy metal efflux pump
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ADL54962.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallione
scnpilot_expt_750_bf_scaffold_1261_13
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13425..13766)
DNA (342bp) protein (114aa)
Nitrogen regulatory protein P-II n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI5_GALCS
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ADL54961.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella
scnpilot_expt_750_bf_scaffold_1261_14
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13776..15365)
DNA (1590bp) protein (530aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI4_GALCS rbh
RND family efflux transporter MFP subunit
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_expt_750_bf_scaffold_1261_15
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15375..16691)
DNA (1317bp) protein (439aa)
Outer membrane efflux protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI3_GALCS rbh
outer membrane efflux protein
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_expt_750_bf_scaffold_1261_16
unknown

Not on your lists

16936..17103
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1261_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17253..17594)
DNA (342bp) protein (114aa)
Nitrogen regulatory protein P-II id=1341260 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
nitrogen regulatory protein P-II Tax=GWE1_Thiobacillus_62_9_curated
nitrogen regulatory protein P-II
scnpilot_expt_750_bf_scaffold_1261_18
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17649..20735)
DNA (3087bp) protein (1029aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEB5_GALCS rbh
CzcA family heavy metal efflux pump Tax=GWA2_Gallionellales_54_124_curated
CzcA family heavy metal efflux pump
scnpilot_expt_750_bf_scaffold_1261_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20746..21462)
DNA (717bp) protein (239aa)
Efflux transporter, RND family, MFP subunit id=1332410 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB Tax=GWE1_Thiobacillus_62_9_curated
RND family efflux transporter MFP subunit
Displaying 19 items

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