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scnpilot_expt_750_bf_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 340 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_32_1
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)
Elongation factor Tu (Fragment) n=6 Tax=Achromobacter RepID=J4Y5J4_9BURK
Translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacter
scnpilot_expt_750_bf_scaffold_32_trna_6
unknown

Not on your lists

comp(152..223)
DNA (72bp)
transferRNA
scnpilot_expt_750_bf_scaffold_32_trna_5
unknown

Not on your lists

comp(264..334)
DNA (71bp)
transferRNA
scnpilot_expt_750_bf_scaffold_32_trna_4
unknown

Not on your lists

comp(394..475)
DNA (82bp)
transferRNA
scnpilot_expt_750_bf_scaffold_32_2
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

806..4342
DNA (3537bp) protein (1179aa)
Pyruvate ferredoxin/flavodoxin oxidoreductase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJS7_ACCPU rbh
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:KFB65955.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibac
indolepyruvate ferredoxin oxidoreductase rbh
scnpilot_expt_750_bf_scaffold_32_3
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4426..5238
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RUB6_ACCPU rbh
Uncharacterized protein {ECO:0000313|EMBL:KFB72131.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_32_4
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5300..7177
DNA (1878bp) protein (626aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rh
Signal transduction histidine kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNZ6_AZOSU rbh
signal transduction histidine kinase rbh
scnpilot_expt_750_bf_scaffold_32_5
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7167..7817)
DNA (651bp) protein (217aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNZ7_AZOSU rbh
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:AEV24796.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales
scnpilot_expt_750_bf_scaffold_32_6
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7937..8386
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNZ8_AZOSU
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_expt_750_bf_scaffold_32_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8414..9319)
DNA (906bp) protein (302aa)
Auxin Efflux Carrier n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JG0_DECAR rbh
auxin efflux carrier
Auxin Efflux Carrier {ECO:0000313|EMBL:AAZ45021.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica
scnpilot_expt_750_bf_scaffold_32_8
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9338..10522)
DNA (1185bp) protein (395aa)
Formyl-coenzyme A transferase {ECO:0000313|EMBL:KFB76665.1}; EC=2.8.3.16 {ECO:0000313|EMBL:KFB76665.1};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTV6_ACCPU rbh
L-carnitine dehydratase/bile acid-inducible protein F
scnpilot_expt_750_bf_scaffold_32_9
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10519..11751)
DNA (1233bp) protein (411aa)
Phenylacetate-CoA ligase n=1 Tax=Azoarcus sp. KH32C RepID=H0PUN4_9RHOO rbh
phenylacetate-CoA ligase
Phenylacetate-CoA ligase {ECO:0000313|EMBL:BAL26308.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
scnpilot_expt_750_bf_scaffold_32_10
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12045..12878)
DNA (834bp) protein (278aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK82_AZOSU rbh
branched-chain amino acid ABC transporter ATPase
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:AEV25515.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae;
scnpilot_expt_750_bf_scaffold_32_11
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12936..14267)
DNA (1332bp) protein (444aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK81_AZOSU rbh
branched-chain amino acid ABC transporter periplasmic protein
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:AEV25514.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocy
scnpilot_expt_750_bf_scaffold_32_12
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14311..15378)
DNA (1068bp) protein (356aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK80_AZOSU rbh
branched-chain amino acid ABC transporter permease
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:AEV25513.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae
scnpilot_expt_750_bf_scaffold_32_13
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15392..16285)
DNA (894bp) protein (298aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK79_AZOSU rbh
branched-chain amino acid ABC-type transport system, permease component
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:AEV25512.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocycla
scnpilot_expt_750_bf_scaffold_32_14
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16308..17093)
DNA (786bp) protein (262aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK78_AZOSU rbh
branched-chain amino acid ABC transporter ATPase rbh
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:AEV25511.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae;
scnpilot_expt_750_bf_scaffold_32_15
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17119..19077)
DNA (1959bp) protein (653aa)
AMP-dependent synthetase and ligase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTU9_ACCPU rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACV34925.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (s
AMP-dependent synthetase and ligase rbh
scnpilot_expt_750_bf_scaffold_32_16
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19336..20010
DNA (675bp) protein (225aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTU8_ACCPU rbh
cAMP regulatory protein {ECO:0000313|EMBL:EXI79734.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
Crp/Fnr family transcriptional regulator rbh
scnpilot_expt_750_bf_scaffold_32_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20089..21384)
DNA (1296bp) protein (432aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1T9_VARPE
acetyL-CoA hydrolase/transferase
Acetyl-CoA hydrolase/transferase {ECO:0000313|EMBL:ADU36845.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax pa
scnpilot_expt_750_bf_scaffold_32_18
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21473..23146)
DNA (1674bp) protein (558aa)
Predicted symporter n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W3Z5_MAGSA rbh
actP; acetate permease; K03307 solute:Na+ symporter, SSS family Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
actP; acetate permease
scnpilot_expt_750_bf_scaffold_32_19
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23143..23454)
DNA (312bp) protein (104aa)
membrane protein n=1 Tax=Aquaspirillum serpens RepID=UPI0003B3EC8C
Membrane protein {ECO:0000313|EMBL:KJB90494.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata K
hypothetical protein
scnpilot_expt_750_bf_scaffold_32_20
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23695..25734
DNA (2040bp) protein (680aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JJ7_DECAR rbh
PAS
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_expt_750_bf_scaffold_32_21
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25731..26471
DNA (741bp) protein (247aa)
transcriptional regulator n=1 Tax=Aquaspirillum serpens RepID=UPI0003B45A12 rbh
virG; DNA-binding response regulator
Probable DNA-binding response regulator {ECO:0000313|EMBL:CAL93310.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp
scnpilot_expt_750_bf_scaffold_32_22
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26485..27642)
DNA (1158bp) protein (386aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGR0_AZOSU rbh
branched-chain amino acid ABC transporter periplasmic protein
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:AEV26196.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocy
scnpilot_expt_750_bf_scaffold_32_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27880..29769)
DNA (1890bp) protein (630aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJ90_ACCPU
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=CG_Rhodof_02
methyl-accepting chemotaxis sensory transducer
scnpilot_expt_750_bf_scaffold_32_24
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30235..31959
DNA (1725bp) protein (575aa)
Cytochrome c, mono-and diheme variants family n=3 Tax=Azospira RepID=G8QJ29_AZOSU rbh
Cytochrome c, mono-and diheme variants family {ECO:0000313|EMBL:AEV26447.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azosp
cytochrome c, mono- and diheme variants family
scnpilot_expt_750_bf_scaffold_32_25
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32054..33541
DNA (1488bp) protein (496aa)
Cyclic nucleotide-binding protein n=1 Tax=Thauera sp. 63 RepID=N6XDP9_9RHOO rbh
cyclic nucleotide-binding protein
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_expt_750_bf_scaffold_32_26
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33734..34342
DNA (609bp) protein (203aa)
Diamine N-acetyltransferase (EC:2.3.1.57)
Diamine N-acetyltransferase n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G7Z0_ENTLS
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_expt_750_bf_scaffold_32_27
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34386..37664)
DNA (3279bp) protein (1093aa)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:ACV33843.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ACV33843.1};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumu
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RL21_ACCPU rbh
Displaying items 1-30 of 340 in total

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