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scnpilot_expt_750_bf_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 366 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_46_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152..1990
DNA (1839bp) protein (613aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNZ8_9GAMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM48413.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" sou
scnpilot_expt_750_bf_scaffold_46_trna_4
unknown

Not on your lists

comp(2755..2842)
DNA (88bp)
transferRNA
scnpilot_expt_750_bf_scaffold_46_2
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2902..3207)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003776E77
hypothetical protein Tax=GWA2_Gallionellales_60_18_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_46_3
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3288..3875
DNA (588bp) protein (196aa)
Tetratricopeptide repeat protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIG8_AZOSU
tetratricopeptide repeat protein Tax=GWA2_Gallionellales_60_18_curated
tetratricopeptide repeat protein
scnpilot_expt_750_bf_scaffold_46_4
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3961..4224)
DNA (264bp) protein (88aa)
Putative solute:sodium symporter small subunit n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIG7_AZOSU
putative solute:sodium symporter small subunit
Putative solute:sodium symporter small subunit {ECO:0000313|EMBL:AEV26379.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azos
scnpilot_expt_750_bf_scaffold_46_5
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4265..6313)
DNA (2049bp) protein (683aa)
SSS sodium solute transporter superfamily n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKT2_ACCPU rbh
SSS sodium solute transporter superfamily protein
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:ACV37002.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phospha
scnpilot_expt_750_bf_scaffold_46_6
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6343..7062)
DNA (720bp) protein (240aa)
DNA polymerase III epsilon subunit-like 3'-5' exonuclease n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIG5_AZOSU rbh
DNA polymerase III epsilon subunit-like 3'-5' exonuclease rbh
DNA polymerase III epsilon subunit-like 3'-5' exonuclease {ECO:0000313|EMBL:AEV26377.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;"
scnpilot_expt_750_bf_scaffold_46_7
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7067..8977)
DNA (1911bp) protein (637aa)
Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RL55_ACCPU rbh
putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase {ECO:0000313|EMBL:ACV37004.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.
scnpilot_expt_750_bf_scaffold_46_8
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9164..11146)
DNA (1983bp) protein (661aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
Acetyl-coenzyme A synthetase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RL56_ACCPU rbh
acetyl-CoA synthetase rbh
scnpilot_expt_750_bf_scaffold_46_9
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11439..11951
DNA (513bp) protein (171aa)
UPF0114 protein CAP2UW1_3756 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RL57_ACCPU
UPF0114 protein AW11_00841 {ECO:0000256|HAMAP-Rule:MF_00143}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA
hypothetical protein
scnpilot_expt_750_bf_scaffold_46_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12067..15426
DNA (3360bp) protein (1120aa)
SNF2-like helicase n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5R7N0_9RHOO rbh
SNF2-related protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SNF2-related protein
scnpilot_expt_750_bf_scaffold_46_11
unknown

Not on your lists

comp(15663..16250)
DNA (588bp) protein (196aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_46_12
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16628..17080)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12D04_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE43588.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Po
scnpilot_expt_750_bf_scaffold_46_13
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17211..18839
DNA (1629bp) protein (543aa)
GTPase HflX n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47CI1_DECAR rbh
GTP-binding protein, HSR1-related rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocycla
scnpilot_expt_750_bf_scaffold_46_14
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19003..20523
DNA (1521bp) protein (507aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RL58_ACCPU rbh
hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit {ECO:0000313|EMBL:ACV37007.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" sourc
scnpilot_expt_750_bf_scaffold_46_15
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20605..20961
DNA (357bp) protein (119aa)
Putative aminoacrylate peracid reductase RutC {ECO:0000313|EMBL:KFB77561.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFB77561.1};; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus
Putative translation initiation inhibitor, yjgF family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIF9_AZOSU
putative translation initiation inhibitor, yjgF family
scnpilot_expt_750_bf_scaffold_46_16
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20970..21302
DNA (333bp) protein (111aa)
multidrug transporter n=1 Tax=Duganella zoogloeoides RepID=UPI000378BD8A
Ethidium bromide resistance protein {ECO:0000313|EMBL:EZQ18864.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
qacE; Quaternary ammonium compound-resistance protein qacE
scnpilot_expt_750_bf_scaffold_46_17
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21336..22121
DNA (786bp) protein (262aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=522306 species="Bacteria; Prote
Glutamate racemase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RL60_ACCPU rbh
scnpilot_expt_750_bf_scaffold_46_18
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22135..23499
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000379427A
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:KIF80608.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbasp
NAD(FAD)-utilizing dehydrogenase
scnpilot_expt_750_bf_scaffold_46_19
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23523..24548
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RL62_ACCPU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV37011.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
scnpilot_expt_750_bf_scaffold_46_20
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24575..25021
DNA (447bp) protein (149aa)
UPF0178 protein Tgr7_2584 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=Y2584_THISH
hypothetical protein
UPF0178 protein Tgr7_2584 {ECO:0000255|HAMAP-Rule:MF_00489}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thio
scnpilot_expt_750_bf_scaffold_46_21
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25130..26740
DNA (1611bp) protein (537aa)
Peptide chain release factor 3 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RL63_ACCPU rbh
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1454004 species="Bacteria; Proteobacteria; Betapro
prfC; peptide chain release factor 3
scnpilot_expt_750_bf_scaffold_46_22
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26775..28391
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHF5_AZOSU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV27348.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain AT
scnpilot_expt_750_bf_scaffold_46_23
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28388..29107
DNA (720bp) protein (240aa)
Outer membrane protein/peptidoglycan-associated (Lipo)protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHF6_AZOSU
outer membrane protein/peptidoglycan-associated (lipo)protein
Outer membrane protein/peptidoglycan-associated (Lipo)protein {ECO:0000313|EMBL:AEV27349.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira
scnpilot_expt_750_bf_scaffold_46_24
unknown

Not on your lists

29135..29668
DNA (534bp) protein (178aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_46_25
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29851..31416
DNA (1566bp) protein (522aa)
adenine-specific DNA methyltransferase (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A546_METMM rbh
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:AEG00376.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomon
scnpilot_expt_750_bf_scaffold_46_26
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31481..32695
DNA (1215bp) protein (405aa)
Type I restriction-modification system, specificity subunit S n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VW79_9BURK rbh
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:EGF33134.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" so
restriction modification system DNA specificity domain-containing protein
scnpilot_expt_750_bf_scaffold_46_27
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32845..33942
DNA (1098bp) protein (366aa)
cell filamentation protein Fic n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000379219B rbh
filamentation induced by cAMP protein Fic
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_expt_750_bf_scaffold_46_28
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33955..37107
DNA (3153bp) protein (1051aa)
DEAD/DEAH box helicase n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U0ZKR0_9NEIS rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:ERE05317.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenk
HsdR family type I site-specific deoxyribonuclease
scnpilot_expt_750_bf_scaffold_46_29
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37135..37605)
DNA (471bp) protein (157aa)
Transcriptional regulator, AsnC family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RP34_ACCPU
AsnC family transcriptional regulator
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Displaying items 1-30 of 366 in total

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