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scnpilot_expt_750_bf_scaffold_924

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_924_1
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..98)
DNA (96bp) protein (32aa)
Elongation factor Tu (Fragment) n=6 Tax=Achromobacter RepID=J4Y5J4_9BURK
Translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacter
scnpilot_expt_750_bf_scaffold_924_2
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124..2217)
DNA (2094bp) protein (698aa)
Elongation factor G n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YS51_9RHOO rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae
translation elongation factor EF-G
scnpilot_expt_750_bf_scaffold_924_3
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2269..2739)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=RS7_DECAR
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas ar
scnpilot_expt_750_bf_scaffold_924_4
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2833..3210)
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJE6_ACCPU
30S ribosomal protein S12
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=GWA2_Rhodocyclales_65_20_curated
scnpilot_expt_750_bf_scaffold_924_5
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3377..7588)
DNA (4212bp) protein (1404aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJE7_ACCPU rbh
DNA-directed RNA polymerase subunit beta'
scnpilot_expt_750_bf_scaffold_924_6
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7671..11951)
DNA (4281bp) protein (1427aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJE8_ACCPU rbh
rpoB; DNA-directed RNA polymerase subunit beta rbh
scnpilot_expt_750_bf_scaffold_924_7
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12231..12602)
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNY6_AZOSU
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (
scnpilot_expt_750_bf_scaffold_924_8
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12654..13151)
DNA (498bp) protein (166aa)
50S ribosomal protein L10 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNY7_AZOSU
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (str
scnpilot_expt_750_bf_scaffold_924_9
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13432..14121)
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNY8_AZOSU rbh
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (stra
scnpilot_expt_750_bf_scaffold_924_10
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14123..14554)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003667FF6
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herba
rplK; 50S ribosomal protein L11
scnpilot_expt_750_bf_scaffold_924_11
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14679..15212)
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJS3_ACCPU rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus
nusG; transcription antitermination protein NusG
scnpilot_expt_750_bf_scaffold_924_12
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15209..15562)
DNA (354bp) protein (118aa)
Protein translocase subunit SecE n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJS4_ACCPU
secE; preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumuli
scnpilot_expt_750_bf_scaffold_924_trna_1
unknown

Not on your lists

comp(15587..15659)
DNA (73bp)
transferRNA
scnpilot_expt_750_bf_scaffold_924_13
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15719..15814)
DNA (96bp) protein (32aa)
Elongation factor Tu {ECO:0000313|EMBL:KIX43844.1}; EC=3.6.5.3 {ECO:0000313|EMBL:KIX43844.1};; Flags: Fragment;; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Bur
Translation elongation factor Tu n=1 Tax=Ralstonia solanacearum FQY_4 RepID=M4UGL0_RALSL
elongation factor Tu C-terminal domain protein
Displaying 14 items

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