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scnpilot_expt_750_bf_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 204 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_85_1
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97..996)
DNA (900bp) protein (300aa)
Transposase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TBT0_9GAMM
Transposase {ECO:0000313|EMBL:EIT71345.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa
integrase catalytic subunit
scnpilot_expt_750_bf_scaffold_85_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1088..2176)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00037384BD
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_85_3
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2962..3333
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:CAP52467.1}; TaxID=509169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campes
scnpilot_expt_750_bf_scaffold_85_4
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3569..5383
DNA (1815bp) protein (605aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrob
Putative DNA helicase (Modular protein) n=1 Tax=Rhizobium sp. RepID=L0NNA9_RHISP rbh
DNA/RNA helicase
scnpilot_expt_750_bf_scaffold_85_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5397..7256
DNA (1860bp) protein (620aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E34589 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP79504.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
hypothetical protein
scnpilot_expt_750_bf_scaffold_85_6
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7253..8236)
DNA (984bp) protein (328aa)
TIR protein n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7L2Y1_METC4 rbh
TIR protein
TIR protein {ECO:0000313|EMBL:ACK86189.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquen
scnpilot_expt_750_bf_scaffold_85_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8308..9795)
DNA (1488bp) protein (496aa)
Integrase n=1 Tax=Xanthomonas citri subsp. citri Aw12879 RepID=M4VWG8_XANCI
Uncharacterized protein {ECO:0000313|EMBL:KGI76896.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
Phage integrase family
scnpilot_expt_750_bf_scaffold_85_8
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10039..10428)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9P7V2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KFA35859.1}; TaxID=1094180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasic
hypothetical protein
scnpilot_expt_750_bf_scaffold_85_9
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10849..12828
DNA (1980bp) protein (660aa)
RHS repeat-associated core domain protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VT62_9CYAN
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AFZ10677.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nig
scnpilot_expt_750_bf_scaffold_85_10
unknown

Not on your lists

12825..13391
DNA (567bp) protein (189aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_85_11
Listeria ivanovii, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13399..14019
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Listeria ivanovii (strain ATCC BAA-678 / PAM 55) RepID=G2ZEM6_LISIP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW85538.1}; TaxID=881621 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria ivanovii (strain ATCC BAA-678 / PAM 5
scnpilot_expt_750_bf_scaffold_85_12
unknown

Not on your lists

comp(14408..15274)
DNA (867bp) protein (289aa)
hypothetical protein
scnpilot_expt_750_bf_scaffold_85_13
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15406..16149)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D1C4_STEMA
Strain LMCP11 contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27760.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;
hypothetical protein
scnpilot_expt_750_bf_scaffold_85_14
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16146..17021)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y79_RHOFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD69274.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireduce
scnpilot_expt_750_bf_scaffold_85_15
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17326..18288
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HQ65_RUBGI rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM55995.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
hypothetical protein rbh
scnpilot_expt_750_bf_scaffold_85_16
unknown

Not on your lists

18485..18706
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_85_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18993..19289)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI00036D8882
Uncharacterized protein {ECO:0000313|EMBL:KFJ11474.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseud
hypothetical protein
scnpilot_expt_750_bf_scaffold_85_18
Gluconobacter frateurii, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19498..20082)
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Pseudomonas syringae group RepID=F3ID09_PSESL
Uncharacterized protein {ECO:0000313|EMBL:GAN90095.1}; TaxID=1231354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter
hypothetical protein
scnpilot_expt_750_bf_scaffold_85_19
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20481..23597)
DNA (3117bp) protein (1039aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
dnaE2; DNA polymerase (EC:2.7.7.7)
DNA polymerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D26FBB rbh
scnpilot_expt_750_bf_scaffold_85_20
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23635..25041)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AMM1_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN50120.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resin
scnpilot_expt_750_bf_scaffold_85_21
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25049..25675)
DNA (627bp) protein (209aa)
CDP-6-deoxy-delta-3,4-glucoseen reductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000311E612
RecA/RadA recombinase {ECO:0000313|EMBL:ELS27295.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudo
hypothetical protein
scnpilot_expt_750_bf_scaffold_85_22
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25675..26292)
DNA (618bp) protein (206aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1385517 species="Bacteria; Proteo
umuDC operon protein-like protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003087BA1
transcriptional repressor, LexA family
scnpilot_expt_750_bf_scaffold_85_23
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

26654..27538
DNA (885bp) protein (295aa)
id=4142265 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4142265 Tax=GWF2_Lentisphaerae_50_93_curated
scnpilot_expt_750_bf_scaffold_85_24
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27569..27856)
DNA (288bp) protein (96aa)
Helix-turn-helix protein n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0BZP8_9XANT
DNA-binding protein {ECO:0000313|EMBL:KER80926.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola
DNA-binding protein
scnpilot_expt_750_bf_scaffold_85_25
unknown

Not on your lists

27991..29049
DNA (1059bp) protein (353aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_85_26
unknown

Not on your lists

comp(29062..29334)
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_85_27
unknown

Not on your lists

comp(29339..29668)
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_85_28
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29782..30897
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EU35_BRASB
Uncharacterized protein {ECO:0000313|EMBL:AKC86952.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
hypothetical protein
scnpilot_expt_750_bf_scaffold_85_29
Geobacillus kaustophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31169..32212
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA016 RepID=U9M1E8_PSEAI rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:GAD15307.1}; TaxID=1337888 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus kaustophilus GBlys.;
cobyrinic acid ac-diamide synthase
scnpilot_expt_750_bf_scaffold_85_30
Geobacillus sp. A8, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32216..32950
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA016 RepID=U9M6A9_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB94185.1}; Flags: Fragment;; TaxID=1095383 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. A8.;"
Displaying items 1-30 of 204 in total

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