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scnpilot_expt_750_bf_scaffold_100

Search features with annotation key words

Displaying items 1-30 of 581 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_100_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

483..1661
DNA (1179bp) protein (393aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E2FAC8 rbh
Membrane protein {ECO:0000313|EMBL:AHY61030.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
benzoate transporter
scnpilot_expt_750_bf_scaffold_100_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1704..3863)
DNA (2160bp) protein (720aa)
Epimerase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CS37_STEMA rbh
Epimerase {ECO:0000313|EMBL:AHY61028.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila
epimerase
scnpilot_expt_750_bf_scaffold_100_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3937..4911)
DNA (975bp) protein (325aa)
methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DCF69D rbh
Methyltransferase {ECO:0000313|EMBL:AHY61027.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rh
hypothetical protein
scnpilot_expt_750_bf_scaffold_100_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4911..6230)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EA07A7 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM87546.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
hypothetical protein
scnpilot_expt_750_bf_scaffold_100_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6268..6555)
DNA (288bp) protein (96aa)
UPF0225 protein EPM1_1004 n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3GB80_STEMA
UPF0225 protein BW38_03997 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Steno
hypothetical protein
scnpilot_expt_750_bf_scaffold_100_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6744..7520
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KUE9_STEMA rbh
Membrane protein {ECO:0000313|EMBL:AHY61023.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
hypothetical protein
scnpilot_expt_750_bf_scaffold_100_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7620..8363
DNA (744bp) protein (248aa)
short-chain dehydrogenase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002ED4A33 rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADV28885.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" sour
scnpilot_expt_750_bf_scaffold_100_8
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8519..11389
DNA (2871bp) protein (957aa)
TonB-denpendent receptor n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KAM0_STEMA rbh
TonB-dependent receptor {ECO:0000313|EMBL:KGM54708.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenici
TonB-dependent receptor
scnpilot_expt_750_bf_scaffold_100_9
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11709..12086)
DNA (378bp) protein (126aa)
membrane protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B33903
Leukotriene C4 synthase like protein {ECO:0000313|EMBL:EGG94942.1}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteobacterium IMCC1989.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_100_10
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12156..12755)
DNA (600bp) protein (200aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase I n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000376B8EF rbh
GTP cyclohydrolase
scnpilot_expt_750_bf_scaffold_100_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12885..13523)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLV7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL88198.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
rpi2; hypothetical protein rbh
scnpilot_expt_750_bf_scaffold_100_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13594..14349)
DNA (756bp) protein (252aa)
Short chain dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLV8_9GAMM rbh
Short chain dehydrogenase {ECO:0000313|EMBL:EIL88199.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
2-deoxy-D-gluconate 3-dehydrogenase
scnpilot_expt_750_bf_scaffold_100_13
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14553..15626)
DNA (1074bp) protein (358aa)
LacI family transcription regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D2E6F6 rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:AHY60927.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source=
LacI family transcriptional regulator
scnpilot_expt_750_bf_scaffold_100_14
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15813..17096)
DNA (1284bp) protein (428aa)
TRAP dicarboxylate transporter subunit DctM n=2 Tax=Stenotrophomonas maltophilia RepID=M5TVE2_STEMA rbh
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:EZP42637.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;"
TRAP dicarboxylate transporter subunit DctM rbh
scnpilot_expt_750_bf_scaffold_100_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17100..17618)
DNA (519bp) protein (173aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLJ5_9GAMM
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:EIL88086.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
tripartite ATP-independent periplasmic transporter DctQ component
scnpilot_expt_750_bf_scaffold_100_16
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17631..18635)
DNA (1005bp) protein (335aa)
C4-dicarboxylate ABC transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000380E9E4 rbh
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:AHY60932.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Sten
C4-dicarboxylate ABC transporter
scnpilot_expt_750_bf_scaffold_100_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18672..19496)
DNA (825bp) protein (275aa)
2-keto-4-pentenoate hydratase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLJ7_9GAMM rbh
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:EIL88088.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
2-keto-4-pentenoate hydratase
scnpilot_expt_750_bf_scaffold_100_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19626..20624
DNA (999bp) protein (333aa)
Acylaminoacyl-peptidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLJ8_9GAMM rbh
Acylaminoacyl-peptidase {ECO:0000313|EMBL:EIL88089.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
xylanase
scnpilot_expt_750_bf_scaffold_100_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20621..22228
DNA (1608bp) protein (536aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Carboxylesterase type B n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLJ9_9GAMM rbh
carboxylesterase
scnpilot_expt_750_bf_scaffold_100_20
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22298..22894
DNA (597bp) protein (199aa)
cysteine dioxygenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000313D5F0
Cysteine dioxygenase {ECO:0000313|EMBL:AHY60937.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas
cysteine dioxygenase type I
scnpilot_expt_750_bf_scaffold_100_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22958..26767)
DNA (3810bp) protein (1270aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLV5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL88196.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein rbh
scnpilot_expt_750_bf_scaffold_100_22
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26903..29653)
DNA (2751bp) protein (917aa)
TonB-denpendent receptor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037AD9B2 rbh
TonB-dependent receptor {ECO:0000313|EMBL:AKC86689.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
TonB-dependent receptor
scnpilot_expt_750_bf_scaffold_100_23
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29926..30948
DNA (1023bp) protein (341aa)
2-keto-3-deoxygluconate kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLV3_9GAMM rbh
2-keto-3-deoxygluconate kinase {ECO:0000313|EMBL:EIL88194.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
2-keto-3-deoxygluconate kinase rbh
scnpilot_expt_750_bf_scaffold_100_24
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30935..31573
DNA (639bp) protein (213aa)
2-dehydro-3-deoxyphosphogluconate aldolase (EC:4.1.2.14)
2-dehydro-3-deoxyphosphogluconate aldolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030ECAC3 rbh
2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:AHY60943.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" so
scnpilot_expt_750_bf_scaffold_100_25
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31686..32714
DNA (1029bp) protein (343aa)
Alcohol dehydrogenase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z441_XANCT rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KCX01883.1}; TaxID=69929 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricol
alcohol dehydrogenase
scnpilot_expt_750_bf_scaffold_100_26
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32781..34946)
DNA (2166bp) protein (722aa)
Putative tonB-dependent receptor yncD n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SXF2_XANCT rbh
Putative tonB-dependent receptor yncD {ECO:0000313|EMBL:CCP40024.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xan
iron transporter rbh
scnpilot_expt_750_bf_scaffold_100_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35072..36274
DNA (1203bp) protein (401aa)
Aromatic-amino-acid transaminase {ECO:0000313|EMBL:CCP09104.1}; EC=2.6.1.57 {ECO:0000313|EMBL:CCP09104.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
aspC; aromatic-amino-acid aminotransferase (EC:2.6.1.57)
aspartate aminotransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003122E4E rbh
scnpilot_expt_750_bf_scaffold_100_28
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36345..37580)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00036D3BCC rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM53615.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
membrane protein
scnpilot_expt_750_bf_scaffold_100_29
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37769..38782
DNA (1014bp) protein (338aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosph
fbp; Fructose-1,6-bisphosphatase, type I (EC:3.1.3.11)
fructose-1 6-bisphosphatase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F52B7F rbh
scnpilot_expt_750_bf_scaffold_100_30
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38858..39949)
DNA (1092bp) protein (364aa)
Radical SAM domain protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K256_STEMA rbh
radical SAM domain-containing protein
Radical SAM domain-containing protein {ECO:0000313|EMBL:EMI47595.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotro
Displaying items 1-30 of 581 in total

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