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scnpilot_expt_750_bf_scaffold_169

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Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_169_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..117
DNA (117bp) protein (39aa)
Glucokinase {ECO:0000313|EMBL:AHY57696.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AHY57696.1};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotroph
glucokinase (EC:2.7.1.2)
Glucokinase n=1 Tax=uncultured organism RepID=T1WCC4_9ZZZZ
scnpilot_expt_750_bf_scaffold_169_2
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

233..3031
DNA (2799bp) protein (933aa)
TonB-dependent receptor n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WP95_PSEUU rbh
TonB-dependent receptor {ECO:0000313|EMBL:ADV26068.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" s
TonB-dependent receptor
scnpilot_expt_750_bf_scaffold_169_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3202..5550
DNA (2349bp) protein (783aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Glycosyl hydrolase family 20, catalytic domain n=1 Tax=uncultured organism RepID=T1WBX3_9ZZZZ
Stenotrophomonas maltophilia strain ZBG7B contig_50, whole genome shotgun sequence {ECO:0000313|EMBL:KIP85229.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
scnpilot_expt_750_bf_scaffold_169_4
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5609..6856)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002E6E54D rbh
Uncharacterized protein {ECO:0000313|EMBL:GAJ41550.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus NBRC 107762.
hypothetical protein
scnpilot_expt_750_bf_scaffold_169_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6944..9244
DNA (2301bp) protein (767aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WP94_PSEUU
Beta-hexosaminidase {ECO:0000313|EMBL:AKC86521.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomona
scnpilot_expt_750_bf_scaffold_169_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9311..9676)
DNA (366bp) protein (122aa)
Mannose-6-phosphate isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUN8_9GAMM
mannose-6-phosphate isomerase Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
mannose-6-phosphate isomerase
scnpilot_expt_750_bf_scaffold_169_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9988..10401)
DNA (414bp) protein (138aa)
VanZ like family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8Z2_9GAMM
Membrane protein {ECO:0000313|EMBL:KDE89481.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia
hypothetical protein
scnpilot_expt_750_bf_scaffold_169_8
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10398..11582)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000317E4D1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP46674.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophom
hypothetical protein
scnpilot_expt_750_bf_scaffold_169_9
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11637..12374
DNA (738bp) protein (246aa)
pteridine reductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EF18F6 rbh
Pteridine reductase {ECO:0000313|EMBL:AHY57691.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas
pteridine reductase rbh
scnpilot_expt_750_bf_scaffold_169_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12467..12955)
DNA (489bp) protein (163aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Xanthomonas axonopodis RepID=UPI00030BBD8C
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:AHY57690.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
folK1; probable 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
scnpilot_expt_750_bf_scaffold_169_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13077..14597)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7V9B6_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP79156.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
histidine sensor kinase/response regulator fusion protein
scnpilot_expt_750_bf_scaffold_169_12
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14604..15044)
DNA (441bp) protein (147aa)
Two-component system response regulator n=4 Tax=Xanthomonas campestris RepID=B0RNR6_XANCB
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:CEM56984.1}; TaxID=340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanth
scnpilot_expt_750_bf_scaffold_169_13
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15056..16861)
DNA (1806bp) protein (602aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Two-component system sensor protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8Y5_9GAMM rbh
multi-sensor signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_169_14
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17055..17402)
DNA (348bp) protein (116aa)
Putative periplasmic or secreted lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=M4NER2_9GAMM
putative periplasmic or secreted lipoprotein
periplasmic or secreted lipoprotein Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_expt_750_bf_scaffold_169_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17421..18335)
DNA (915bp) protein (305aa)
6-phosphogluconate dehydrogenase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036F9CDC rbh
6-phosphogluconate dehydrogenase
6-phosphogluconate dehydrogenase-like protein {ECO:0000313|EMBL:EMI48548.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas;
scnpilot_expt_750_bf_scaffold_169_16
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18320..19606)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003653000 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY57682.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
putative secreted protein
scnpilot_expt_750_bf_scaffold_169_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19603..20148)
DNA (546bp) protein (182aa)
hypothetical protein, partial n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000377D173
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCP18366.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
scnpilot_expt_750_bf_scaffold_169_18
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20244..22418)
DNA (2175bp) protein (725aa)
Tail-specific protease n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KSV4_STEMA rbh
Carboxyl-terminal protease {ECO:0000313|EMBL:EZP46662.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrop
tail-specific protease
scnpilot_expt_750_bf_scaffold_169_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22804..23811)
DNA (1008bp) protein (336aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KK98_STEMA rbh
lipoyl synthase
scnpilot_expt_750_bf_scaffold_169_20
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23827..24537)
DNA (711bp) protein (237aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
lipB; Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase (EC:2.3.1.181)
lipoate-protein ligase B n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037AEDC9 rbh
scnpilot_expt_750_bf_scaffold_169_21
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24525..24812)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8X6_9GAMM
UPF0250 protein SSKA14_2410 {ECO:0000256|HAMAP-Rule:MF_00659}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Steno
hypothetical protein
scnpilot_expt_750_bf_scaffold_169_22
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24950..25927)
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas RepID=M5CR14_STEMA rbh
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:EED40216.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source
hypothetical protein
scnpilot_expt_750_bf_scaffold_169_23
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26208..27266
DNA (1059bp) protein (353aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003794CDB rbh
Membrane protein {ECO:0000313|EMBL:AHY57676.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
hypothetical protein
scnpilot_expt_750_bf_scaffold_169_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27339..28538)
DNA (1200bp) protein (400aa)
dacC; penicillin-binding protein (EC:3.4.16.4)
Putative penicillin-binding protein {ECO:0000313|EMBL:CAQ47442.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CAQ47442.1};; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xan
Putative penicillin-binding protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FUT2_STRMK rbh
scnpilot_expt_750_bf_scaffold_169_25
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28654..29871)
DNA (1218bp) protein (406aa)
Rare lipoprotein A n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7UTB0_STEMA rbh
RlpA protein {ECO:0000313|EMBL:EZP46656.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RI
rlpA; exported rare lipoprotein A
scnpilot_expt_750_bf_scaffold_169_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29868..30965)
DNA (1098bp) protein (366aa)
mltB; murein hydrolase (EC:3.2.1.-)
murein transglycosylase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037AA151 rbh
Stenotrophomonas maltophilia strain ZBG7B contig_124, whole genome shotgun sequence {ECO:0000313|EMBL:KIP79433.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
scnpilot_expt_750_bf_scaffold_169_27
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31416..32546)
DNA (1131bp) protein (377aa)
rod shape-determining protein RodA n=1 Tax=Xanthomonas sacchari RepID=UPI00026320E7 rbh
rod shape-determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:AJC47128.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomo
scnpilot_expt_750_bf_scaffold_169_28
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32543..34543)
DNA (2001bp) protein (667aa)
Penicillin-binding protein 2 (PBP-2) n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KSW4_STEMA rbh
Penicillin-binding protein 2 (PBP-2) {ECO:0000313|EMBL:CCH14156.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrop
mrdA; penicillin-binding protein 2 (PBP-2)
scnpilot_expt_750_bf_scaffold_169_29
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34547..35032)
DNA (486bp) protein (162aa)
Probable rod shape-determining protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UC57_XANAP
mreD; rod shape-determining protein
Probable rod shape-determining protein {ECO:0000313|EMBL:CBA15325.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xan
scnpilot_expt_750_bf_scaffold_169_30
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35029..36090)
DNA (1062bp) protein (354aa)
rod shape-determining protein MreC n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003824881 rbh
mreC; Rod shape-determining protein MreC
Rod shape-determining protein MreC {ECO:0000313|EMBL:ACF53152.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotropho
Displaying items 1-30 of 127 in total

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