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scnpilot_expt_750_bf_scaffold_562

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_562_trna_1
unknown

Not on your lists

331..401
DNA (71bp)
transferRNA
scnpilot_expt_750_bf_scaffold_562_1
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(423..1484)
DNA (1062bp) protein (354aa)
Integrase family protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z476_9SPHN
Integrase family protein {ECO:0000313|EMBL:EGD60486.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
integrase family protein
scnpilot_expt_750_bf_scaffold_562_2
unknown

Not on your lists

comp(1481..1666)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_562_3
unknown

Not on your lists

comp(1666..1812)
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_562_4
unknown

Not on your lists

comp(1809..2045)
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_562_5
unknown

Not on your lists

comp(2015..2143)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_562_6
unknown

Not on your lists

comp(2163..2534)
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_562_7
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2531..2986)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFG6_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ60011.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_expt_750_bf_scaffold_562_8
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2983..3297)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFG7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ60012.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_expt_750_bf_scaffold_562_9
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3381..3746
DNA (366bp) protein (122aa)
XRE family transcriptional regulator n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J0U0_9SPHN
hypothetical protein
XRE family transcriptional regulator {ECO:0000313|EMBL:EQB15574.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
scnpilot_expt_750_bf_scaffold_562_10
unknown

Not on your lists

3803..4150
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_562_11
unknown

Not on your lists

4460..5773
DNA (1314bp) protein (438aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_562_12
unknown

Not on your lists

5789..6406
DNA (618bp) protein (206aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_562_13
Sutterella wadsworthensis, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6421..7659
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Sutterella wadsworthensis HGA0223 RepID=S3BVM2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EPD98152.1}; TaxID=1203554 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" source="Sutterella wadsworthe
scnpilot_expt_750_bf_scaffold_562_14
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7682..9043
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PKD3_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ88671.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis b
hypothetical protein
scnpilot_expt_750_bf_scaffold_562_15
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9113..10114)
DNA (1002bp) protein (334aa)
UPI0003CFC638 related cluster n=1 Tax=unknown RepID=UPI0003CFC638 rbh
Phage late control protein {ECO:0000313|EMBL:ESZ86324.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas
phage late control protein
scnpilot_expt_750_bf_scaffold_562_16
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10111..10566)
DNA (456bp) protein (152aa)
Phage P2 GpU protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9C9_9SPHN
phage P2 GpU protein; K06906 Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
oxidoreductase
scnpilot_expt_750_bf_scaffold_562_17
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10566..12545)
DNA (1980bp) protein (660aa)
TP901 family phage tail tape measure protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9C8_9SPHN rbh
TP901 family phage tail tape measure protein {ECO:0000313|EMBL:EGD58377.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
TP901 family phage tail tape measure protein
scnpilot_expt_750_bf_scaffold_562_18
unknown

Not on your lists

comp(12542..12679)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_562_19
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12679..13029)
DNA (351bp) protein (117aa)
UPI0003D05B17 related cluster n=1 Tax=unknown RepID=UPI0003D05B17
Tail fiber protein {ECO:0000313|EMBL:ESZ86322.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACI
phage tail E family protein
scnpilot_expt_750_bf_scaffold_562_20
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13152..13652)
DNA (501bp) protein (167aa)
UPI0003D06330 related cluster n=1 Tax=unknown RepID=UPI0003D06330
Major tail tube protein {ECO:0000313|EMBL:ESZ86321.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp.
major tail tube protein
scnpilot_expt_750_bf_scaffold_562_21
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13685..14824)
DNA (1140bp) protein (380aa)
UPI0003D032ED related cluster n=1 Tax=unknown RepID=UPI0003D032ED rbh
Tail sheath protein {ECO:0000313|EMBL:ESZ86320.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CAC
tail sheath protein
scnpilot_expt_750_bf_scaffold_562_22
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14840..15175)
DNA (336bp) protein (112aa)
Putative baseplate assembly protein W n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7DR34_PHAIB
Baseplate assembly protein {ECO:0000313|EMBL:KJH82850.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutze
baseplate assembly protein W
scnpilot_expt_750_bf_scaffold_562_23
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16726..17229)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCQ0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL48380.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
scnpilot_expt_750_bf_scaffold_562_24
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17926..18486)
DNA (561bp) protein (187aa)
UPI0003D04591 related cluster n=1 Tax=unknown RepID=UPI0003D04591
Baseplate assembly protein {ECO:0000313|EMBL:ESZ86318.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas
hypothetical protein
scnpilot_expt_750_bf_scaffold_562_25
unknown

Not on your lists

comp(18660..19202)
DNA (543bp) protein (181aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_562_26
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19199..19801)
DNA (603bp) protein (201aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphin
glycosyl hydrolase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037B19D9
hypothetical protein
scnpilot_expt_750_bf_scaffold_562_27
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19785..20027)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:AJP72259.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_562_28
unknown

Not on your lists

comp(20014..20274)
DNA (261bp) protein (87aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_562_29
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

Not on your lists

comp(20274..23444)
DNA (3171bp) protein (1057aa)
Uncharacterized protein n=1 Tax=Lactobacillus kisonensis F0435 RepID=H1LE90_9LACO
Uncharacterized protein {ECO:0000313|EMBL:KJE92902.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
cell wall surface anchor family protein
Displaying items 1-30 of 45 in total

View Taxonomy