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scnpilot_expt_750_bf_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 201 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_244_trna_1
unknown

Not on your lists

1214..1287
DNA (74bp)
transferRNA
scnpilot_expt_750_bf_scaffold_244_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1591..2025)
DNA (435bp) protein (145aa)
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADU44086.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopse
scnpilot_expt_750_bf_scaffold_244_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2284..3084
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030D6604 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC63446.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_244_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3088..3576)
DNA (489bp) protein (163aa)
Uncharacterized protein n=122 Tax=Pseudomonas RepID=B7UVL8_PSEA8
Histidinol-phosphate aminotransferase {ECO:0000313|EMBL:KFC63445.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC
tRNA proofreading protein
scnpilot_expt_750_bf_scaffold_244_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3573..3851)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XB27_VARPD
Uncharacterized protein {ECO:0000313|EMBL:KFC63444.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_244_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3855..5039)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PD23_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC63443.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
low termperature growth protein
scnpilot_expt_750_bf_scaffold_244_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5115..6707)
DNA (1593bp) protein (531aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
IMP cyclohydrolase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F4C642 rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brady
scnpilot_expt_750_bf_scaffold_244_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6802..8523)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E142B8 rbh
Heparinase II/III family protein {ECO:0000313|EMBL:KFC63441.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
heparinase II/III family protein
scnpilot_expt_750_bf_scaffold_244_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8636..9988)
DNA (1353bp) protein (451aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:KFC63440.1}; EC=2.1.1.- {ECO:0000313|EMBL:KFC63440.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
Sun protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ESQ4_METSB rbh
sun protein
scnpilot_expt_750_bf_scaffold_244_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10002..10949)
DNA (948bp) protein (316aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobi
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000363D2E8 rbh
peptidase family M48
scnpilot_expt_750_bf_scaffold_244_10
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11074..11292
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IK52_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL60065.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
scnpilot_expt_750_bf_scaffold_244_11
unknown

Not on your lists

comp(11323..11556)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_244_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11762..13144
DNA (1383bp) protein (461aa)
Putative enzyme {ECO:0000313|EMBL:KFC63437.1}; EC=2.1.1.- {ECO:0000313|EMBL:KFC63437.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;"
Methyltransferase, cyclopropane fatty acid synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMM9_9RHIZ rbh
methyltransferase domain protein
scnpilot_expt_750_bf_scaffold_244_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13215..13532)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003005048
Uncharacterized protein {ECO:0000313|EMBL:KFC63436.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_244_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13763..14710
DNA (948bp) protein (316aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KFC63435.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KFC63435.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
Glyoxylate reductase (EC:1.1.1.26) rbh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain-containing protein 8 n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0J878_9PSED rbh
scnpilot_expt_750_bf_scaffold_244_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14711..15235)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000371B4CA
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:KFC63434.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.
ErfK/YbiS/YcfS/YnhG family protein
scnpilot_expt_750_bf_scaffold_244_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15369..16133)
DNA (765bp) protein (255aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=1502851 spec
hmuV; Hemin import ATP-binding protein HmuV (EC:3.6.3.34)
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI000363F8BA
scnpilot_expt_750_bf_scaffold_244_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16186..17292)
DNA (1107bp) protein (369aa)
heme ABC transporter permease n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036672E9 rbh
HmuU protein {ECO:0000313|EMBL:KFC63430.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Transport system permease protein
scnpilot_expt_750_bf_scaffold_244_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17289..18242)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002F8FEB6
Periplasmic hemin-binding protein {ECO:0000313|EMBL:KFC63429.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;
periplasmic binding protein
scnpilot_expt_750_bf_scaffold_244_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18529..18876
DNA (348bp) protein (116aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QLM5_METTR
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:KFC63427.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC
antibiotic biosynthesis monooxygenase
scnpilot_expt_750_bf_scaffold_244_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18889..19410
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00031F8716
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:KFC63426.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
huvX; Heme utilization protein HuvX
scnpilot_expt_750_bf_scaffold_244_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19545..20993
DNA (1449bp) protein (483aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC63417.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_expt_750_bf_scaffold_244_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20995..21717)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FE36B6 rbh
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:KFC63416.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85
protein tyrosine/serine phosphatase
scnpilot_expt_750_bf_scaffold_244_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21870..22409
DNA (540bp) protein (180aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1502851 species="Ba
Inorganic pyrophosphatase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8ADL8_RHIRD rbh
ppa; inorganic pyrophosphatase
scnpilot_expt_750_bf_scaffold_244_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22469..23344)
DNA (876bp) protein (292aa)
Putative citrate lyase beta chain protein CitE {ECO:0000313|EMBL:KFC63414.1}; EC=4.1.3.34 {ECO:0000313|EMBL:KFC63414.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E09225 rbh
HpcH/HpaI aldolase/citrate lyase family protein
scnpilot_expt_750_bf_scaffold_244_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23436..25148
DNA (1713bp) protein (571aa)
Threonine dehydratase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZH3_9RHIZ rbh
Threonine dehydratase {ECO:0000313|EMBL:KFC63413.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
pyridoxal-5'-phosphate-dependent protein subunit beta
scnpilot_expt_750_bf_scaffold_244_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25246..26307
DNA (1062bp) protein (354aa)
MaoC domain protein dehydratase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQ36_METNO rbh
MaoC-like dehydratase {ECO:0000313|EMBL:KFC63412.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
MaoC domain-containing protein dehydratase
scnpilot_expt_750_bf_scaffold_244_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26460..26861
DNA (402bp) protein (134aa)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ILL0_METNO
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:KFC63411.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="B
succinate dehydrogenase, cytochrome b556 subunit
scnpilot_expt_750_bf_scaffold_244_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26873..27265
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031D7638
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:KFC63410.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.
succinate dehydrogenase, hydrophobic membrane anchor protein
scnpilot_expt_750_bf_scaffold_244_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27270..29102
DNA (1833bp) protein (611aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
succinate dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000305D55F rbh
Displaying items 1-30 of 201 in total

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