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scnpilot_expt_750_bf_scaffold_373

Search features with annotation key words

Displaying items 1-30 of 291 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_373_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39..1571
DNA (1533bp) protein (511aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
F0F1 ATP synthase subunit alpha (EC:3.4.21.68)
F0F1 ATP synthase subunit alpha n=1 Tax=Methylocystis parvus RepID=UPI0002D5E34E rbh
scnpilot_expt_750_bf_scaffold_373_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1706..2575
DNA (870bp) protein (290aa)
ATP synthase gamma chain n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMJ5_9RHIZ rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1502
F0F1 ATP synthase subunit gamma
scnpilot_expt_750_bf_scaffold_373_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2650..4134
DNA (1485bp) protein (495aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase F1 subunit beta (EC:3.6.3.14)
F0F1 ATP synthase subunit beta n=1 Tax=Methylocystis parvus RepID=UPI0002F4FF82 rbh
scnpilot_expt_750_bf_scaffold_373_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4248..4661
DNA (414bp) protein (138aa)
ATP synthase epsilon chain n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMJ3_9RHIZ
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
atpC; F0F1 ATP synthase subunit epsilon
scnpilot_expt_750_bf_scaffold_373_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4839..5333)
DNA (495bp) protein (165aa)
RNA pyrophosphohydrolase {ECO:0000313|EMBL:KFC72187.1}; EC=3.6.1.- {ECO:0000313|EMBL:KFC72187.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
nudH; dinucleoside polyphosphate hydrolase (EC:3.6.1.-)
RNA pyrophosphohydrolase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SD31_9BRAD
scnpilot_expt_750_bf_scaffold_373_6
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5377..5682)
DNA (306bp) protein (102aa)
ArsR family transcriptional regulator n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0J818_9PSED
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIZ48918.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
ArsR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_373_7
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5775..6875
DNA (1101bp) protein (367aa)
NADH-flavin oxidoreductase/NADH oxidase (EC:1.6.99.1)
NADH-flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ADO69148.1}; EC=1.6.99.1 {ECO:0000313|EMBL:ADO69148.1};; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cy
NADH-flavin oxidoreductase/NADH oxidase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FJ53_STIAD rbh
scnpilot_expt_750_bf_scaffold_373_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6930..10019)
DNA (3090bp) protein (1030aa)
pyrroline-5-carboxylate dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FA4057 rbh
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:KFC72188.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bose
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
scnpilot_expt_750_bf_scaffold_373_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10148..10603
DNA (456bp) protein (152aa)
AsnC family transcriptional regulator n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F5BCD0
Transcriptional regulator {ECO:0000313|EMBL:KFC72189.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
AsnC family transcriptional regulator
scnpilot_expt_750_bf_scaffold_373_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10735..11784
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D5A9F0
Pbp {ECO:0000313|EMBL:KFC72190.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NitT/TauT family transport system substrate-binding protein
scnpilot_expt_750_bf_scaffold_373_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11881..13500
DNA (1620bp) protein (540aa)
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:KFC72193.1}; EC=6.2.1.1 {ECO:0000313|EMBL:KFC72193.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiac
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D4AE00 rbh
AMP-dependent synthetase and ligase
scnpilot_expt_750_bf_scaffold_373_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13509..14612)
DNA (1104bp) protein (368aa)
Cobalamin synthesis protein P47K n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W215_METEP rbh
Putative cobalamin synthesis protein/P47K family protein {ECO:0000313|EMBL:KFC72194.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" s
cobalamin synthesis protein P47K
scnpilot_expt_750_bf_scaffold_373_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14627..15523)
DNA (897bp) protein (299aa)
Putative permease, DMT superfamily n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMI3_9RHIZ
Carboxylate/amino acid/amine transporter {ECO:0000313|EMBL:KFC72195.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp.
Permease of the drug/metabolite transporter (DMT) superfamily
scnpilot_expt_750_bf_scaffold_373_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15542..17071)
DNA (1530bp) protein (510aa)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:KFC72196.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KFC72196.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; B
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000362B836
serine-type D-Ala-D-Ala carboxypeptidase
scnpilot_expt_750_bf_scaffold_373_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17281..18186
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F82BFD rbh
Permease of the drug/metabolite transporter {ECO:0000313|EMBL:KFC72197.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea
DMT superfamily permease
scnpilot_expt_750_bf_scaffold_373_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18346..19515
DNA (1170bp) protein (390aa)
Acetyl CoA synthase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G9R8_9BRAD
Thiolase {ECO:0000313|EMBL:KFC72203.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acetyl CoA synthase
scnpilot_expt_750_bf_scaffold_373_17
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19610..20818
DNA (1209bp) protein (403aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IG24_METNO rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACL61501.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Me
scnpilot_expt_750_bf_scaffold_373_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20822..21142)
DNA (321bp) protein (107aa)
Stress-induced morphogen n=3 Tax=Rhizobiales RepID=H5Y755_9BRAD
Stress-induced morphogen {ECO:0000313|EMBL:KFC72205.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_373_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21193..21810
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F41BAF
Heat shock protein DnaJ-like protein {ECO:0000313|EMBL:KFC72207.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC8
heat shock protein DnaJ domain-containing protein
scnpilot_expt_750_bf_scaffold_373_20
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21863..22717
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2E2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN85277.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
scnpilot_expt_750_bf_scaffold_373_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22729..24720)
DNA (1992bp) protein (664aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KFC72208.1}; EC=5.4.99.2 {ECO:0000313|EMBL:KFC72208.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae
Methylmalonyl-CoA mutase MeaA-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J233_POLGS rbh
methylmalonyl-CoA mutase MeaA-like protein
scnpilot_expt_750_bf_scaffold_373_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24904..25839)
DNA (936bp) protein (312aa)
Cell wall hydrolase SleB n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IEW4_METNO
Uncharacterized protein {ECO:0000313|EMBL:KFC69298.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cell wall hydrolase SleB
scnpilot_expt_750_bf_scaffold_373_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26192..26665)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM91_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC72212.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
protein of unassigned function
scnpilot_expt_750_bf_scaffold_373_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26754..27011)
DNA (258bp) protein (86aa)
glutaredoxin n=1 Tax=Methylobacterium sp. 77 RepID=UPI000379E6CE
Glutaredoxin 3 {ECO:0000313|EMBL:KFC72213.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
grxC; Glutaredoxin
scnpilot_expt_750_bf_scaffold_373_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27060..27920)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030847C4 rbh
Phosphoribosyltransferase {ECO:0000313|EMBL:KFC72214.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phosphoribosyltransferase
scnpilot_expt_750_bf_scaffold_373_trna_1
unknown

Not on your lists

28380..28452
DNA (73bp)
transferRNA
scnpilot_expt_750_bf_scaffold_373_26
unknown

Not on your lists

comp(28533..28640)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_373_27
unknown

Not on your lists

comp(28842..29075)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_373_28
unknown

Not on your lists

comp(29086..29310)
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_373_29
unknown

Not on your lists

comp(29418..29579)
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying items 1-30 of 291 in total

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