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scnpilot_expt_750_bf_scaffold_465

Search features with annotation key words

Displaying items 1-30 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_465_1
unknown

Not on your lists

comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_465_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61..771)
DNA (711bp) protein (237aa)
ATP synthase subunit delta n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMJ7_9RHIZ
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
ATP synthase F1 subunit delta
scnpilot_expt_750_bf_scaffold_465_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(850..3033)
DNA (2184bp) protein (728aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1502851 species="Bacteria;
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003781D88 rbh
primosome assembly protein PriA
scnpilot_expt_750_bf_scaffold_465_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3091..4020
DNA (930bp) protein (310aa)
Tyrosine recombinase XerC n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMK1_9RHIZ rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
integrase family protein
scnpilot_expt_750_bf_scaffold_465_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4031..4831)
DNA (801bp) protein (267aa)
3-oxoacyl-(Acyl-carrier protein) reductase {ECO:0000313|EMBL:EGP08713.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EGP08713.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
short-chain dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI00030CB0FE
scnpilot_expt_750_bf_scaffold_465_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5022..6425
DNA (1404bp) protein (468aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HA
Uronate isomerase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL45_9RHIZ rbh
glucuronate isomerase
scnpilot_expt_750_bf_scaffold_465_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6422..7891
DNA (1470bp) protein (490aa)
Putative mannitol dehydrogenase family protein {ECO:0000313|EMBL:KFC72166.1}; EC=1.1.1.57 {ECO:0000313|EMBL:KFC72166.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
Mannitol dehydrogenase domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJV4_9PROT rbh
uxuB2; D-mannonate oxidoreductase, NAD-binding
scnpilot_expt_750_bf_scaffold_465_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7969..8808
DNA (840bp) protein (280aa)
Extracellular solute-binding protein family 3 n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9VZ21_METEP
Extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:KFC72165.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bos
extracellular solute-binding protein
scnpilot_expt_750_bf_scaffold_465_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8812..9963)
DNA (1152bp) protein (384aa)
amidohydrolase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037C90A3 rbh
Amidohydrolase {ECO:0000313|EMBL:KFC65103.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative amidohydrolase
scnpilot_expt_750_bf_scaffold_465_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10178..11887
DNA (1710bp) protein (570aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1502851 species="Bacteria; Proteoba
lysyl-tRNA synthetase (EC:6.1.1.6)
lysyl-tRNA synthetase n=1 Tax=Methylocystis parvus RepID=UPI0002F39CE1 rbh
scnpilot_expt_750_bf_scaffold_465_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11893..12573
DNA (681bp) protein (227aa)
Nitroreductase n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y4Q2_9RHIZ
Nitroreductase {ECO:0000313|EMBL:KFC65101.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
pnbA; nitroreductase
scnpilot_expt_750_bf_scaffold_465_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12664..13734)
DNA (1071bp) protein (357aa)
Inner membrane protein yedI n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AUV4_AZOBR rbh
yedI; inner membrane protein yedI
ABC transporter {ECO:0000313|EMBL:KJB93648.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KA
scnpilot_expt_750_bf_scaffold_465_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13924..14673
DNA (750bp) protein (250aa)
Enoyl-CoA hydratase/isomerase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CLX2_9RHIZ
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:KFC65094.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_expt_750_bf_scaffold_465_14
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14685..16202)
DNA (1518bp) protein (506aa)
Membrane protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RK11_9PROT rbh
Membrane protein {ECO:0000313|EMBL:EFH12373.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATC
hypothetical protein
scnpilot_expt_750_bf_scaffold_465_15
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16213..16683)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RK10_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH12372.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervica
hypothetical protein
scnpilot_expt_750_bf_scaffold_465_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16778..17779)
DNA (1002bp) protein (334aa)
Tat pathway signal sequence domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RK09_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC65089.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_465_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17949..19352)
DNA (1404bp) protein (468aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IR25_METNO rbh
Peptidoglycan-binding domain 1 {ECO:0000313|EMBL:KFC65088.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptidoglycan-binding domain 1 protein
scnpilot_expt_750_bf_scaffold_465_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19611..22292
DNA (2682bp) protein (894aa)
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036FB63C
Alpha-2-macroglobulin domain protein {ECO:0000313|EMBL:KFC65086.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC8
hypothetical protein
scnpilot_expt_750_bf_scaffold_465_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22241..24820
DNA (2580bp) protein (860aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036157E6
Alpha-2-macroglobulin domain protein {ECO:0000313|EMBL:KFC65086.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC8
alpha-2-macroglobulin domain-containing protein
scnpilot_expt_750_bf_scaffold_465_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24820..26973
DNA (2154bp) protein (718aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003664484 rbh
Penicillin-binding protein 1C {ECO:0000313|EMBL:KFC65085.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
penicillin-binding protein 1C
scnpilot_expt_750_bf_scaffold_465_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26976..30065)
DNA (3090bp) protein (1030aa)
Multidrug efflux transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2JHS2_9PROT rbh
Acriflavin resistance protein {ECO:0000313|EMBL:KFC65084.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
multidrug efflux transporter
scnpilot_expt_750_bf_scaffold_465_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30077..31159)
DNA (1083bp) protein (361aa)
Putative HlyD-like secretion protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNH2_9PROT rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KFC65083.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea
hemolysin D
scnpilot_expt_750_bf_scaffold_465_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31587..32405
DNA (819bp) protein (273aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000317273E
phnC; phosphonate ABC transporter
scnpilot_expt_750_bf_scaffold_465_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32468..33382
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F2CEBE rbh
Phosphonate ABC transporter, periplasmic phosphonate binding protein {ECO:0000313|EMBL:KFC65078.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae
phosphonate ABC transporter periplasmic phosphonate-binding protein
scnpilot_expt_750_bf_scaffold_465_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33530..34408
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EF1439 rbh
Phosphonate uptake transporter {ECO:0000313|EMBL:KFC65077.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phosphonate ABC transporter inner membrane protein
scnpilot_expt_750_bf_scaffold_465_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34408..35262
DNA (855bp) protein (285aa)
phosphonate ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003047BD8 rbh
Phosphonate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:KFC65076.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source
phosphonate ABC transporter inner membrane protein
scnpilot_expt_750_bf_scaffold_465_27
unknown

Not on your lists

35336..35533
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_465_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35549..36292)
DNA (744bp) protein (248aa)
Transcriptional regulator, GntR family n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UIG9_METS4
Transcriptional regulator, GntR family {ECO:0000313|EMBL:KFC65075.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. L
GntR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_465_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36411..36812
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000381329A
Phosphonate metabolism PhnG {ECO:0000313|EMBL:KFC65074.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phnG; PhnG protein
scnpilot_expt_750_bf_scaffold_465_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36827..37414
DNA (588bp) protein (196aa)
Phosphonate C-P lyase system protein PhnH n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I7C4_RHOVT
Phosphonate C-P lyase system protein PhnH {ECO:0000313|EMBL:KFC65073.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp
phosphonate C-P lyase system protein PhnH
Displaying items 1-30 of 191 in total

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