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scnpilot_expt_750_bf_scaffold_497

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_497_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..262
DNA (261bp) protein (87aa)
methyl-accepting chemotaxis protein n=1 Tax=Acidovorax radicis RepID=UPI00023762BA
Putative methyl-accepting chemotaxis protein MCP {ECO:0000313|EMBL:KFC70966.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="B
mcp; methyl-accepting chemotaxis protein
scnpilot_expt_750_bf_scaffold_497_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(352..798)
DNA (447bp) protein (149aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7D2_STAND
ribonuclease H
scnpilot_expt_750_bf_scaffold_497_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(795..1760)
DNA (966bp) protein (322aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|
homoserine kinase (EC:2.7.1.39)
homoserine kinase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003161BCD rbh
scnpilot_expt_750_bf_scaffold_497_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1782..2753)
DNA (972bp) protein (324aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003819D09 rbh
scnpilot_expt_750_bf_scaffold_497_5
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2865..3362
DNA (498bp) protein (166aa)
Probable transcriptional regulator protein, MarR family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J0J7_POLGS
MarR family transcriptional regulator
Probable transcriptional regulator protein, MarR family {ECO:0000313|EMBL:ADZ69665.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (s
scnpilot_expt_750_bf_scaffold_497_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3359..4009
DNA (651bp) protein (217aa)
Glutathione S-transferase domain protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RH91_PHEZH
Glutathione S-transferase {ECO:0000313|EMBL:EYF04439.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondr
glutathione S-transferase domain protein
scnpilot_expt_750_bf_scaffold_497_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4135..5997
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000311A8F7 rbh
Sodium/hydrogen exchanger {ECO:0000313|EMBL:KFC75286.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
potassium efflux system protein
scnpilot_expt_750_bf_scaffold_497_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6130..7005
DNA (876bp) protein (292aa)
UPI0003D01CDC related cluster n=1 Tax=unknown RepID=UPI0003D01CDC
Uncharacterized protein {ECO:0000313|EMBL:KFC75288.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_497_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7042..8937)
DNA (1896bp) protein (632aa)
Methyl-accepting chemotaxis protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EJ27_CAUCE
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:KFC75289.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
Methyl-accepting chemotaxis protein
scnpilot_expt_750_bf_scaffold_497_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9097..9471)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030F1678
Uncharacterized protein {ECO:0000313|EMBL:KFC75290.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_expt_750_bf_scaffold_497_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9622..10527
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000316DCBB rbh
Transcriptional regulator {ECO:0000313|EMBL:KFC75291.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LysR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_497_12
unknown

Not on your lists

comp(10589..10765)
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_497_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10855..12234)
DNA (1380bp) protein (460aa)
glutamate/cysteine ligase (EC:6.3.2.2)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F0C92A rbh
Glutamate-cysteine ligase {ECO:0000313|EMBL:KFC75293.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_expt_750_bf_scaffold_497_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12406..13152)
DNA (747bp) protein (249aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1Z837_METPB rbh
hypothetical protein rbh
scnpilot_expt_750_bf_scaffold_497_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13345..13824
DNA (480bp) protein (160aa)
signal peptide protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI000364BD32
Uncharacterized protein {ECO:0000313|EMBL:KFC75296.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative signal peptide
scnpilot_expt_750_bf_scaffold_497_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13859..14743
DNA (885bp) protein (295aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00188627}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00188633};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LEP5_9RHIZ
4-hydroxybenzoate polyprenyltransferase
scnpilot_expt_750_bf_scaffold_497_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14740..15261)
DNA (522bp) protein (174aa)
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036EA7CD
Uncharacterized protein {ECO:0000313|EMBL:KFC75298.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_497_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15510..16334
DNA (825bp) protein (275aa)
Inositol monophosphatase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LYE3_METRJ rbh
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:KFC75299.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
inositol monophosphatase rbh
scnpilot_expt_750_bf_scaffold_497_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16388..16663
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZS1_STAND
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:KFC75300.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae
hypothetical protein
scnpilot_expt_750_bf_scaffold_497_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16806..17552
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV25_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC75301.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_497_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17549..18853
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003159123 rbh
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:KFC75302.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea
3-deoxy-D-manno-octulosonic-acid transferase
scnpilot_expt_750_bf_scaffold_497_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18853..19746
DNA (894bp) protein (298aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
tetraacyldisaccharide 4''''-kinase n=1 Tax=Xanthobacteraceae RepID=UPI00036EEA7C
scnpilot_expt_750_bf_scaffold_497_23
unknown

Not on your lists

19861..20133
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_497_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20093..20896
DNA (804bp) protein (268aa)
Dienelactone hydrolase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQT9_METS4
Dienelactone hydrolase {ECO:0000313|EMBL:KFC75305.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
dienelactone hydrolase
scnpilot_expt_750_bf_scaffold_497_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20934..22526)
DNA (1593bp) protein (531aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV21_9RHIZ rbh
scnpilot_expt_750_bf_scaffold_497_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22620..23897
DNA (1278bp) protein (426aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
phosphoribosylamine/glycine ligase (EC:6.3.4.13)
phosphoribosylamine--glycine ligase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003083462 rbh
scnpilot_expt_750_bf_scaffold_497_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23930..24844
DNA (915bp) protein (305aa)
Alpha/beta hydrolase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I6B5_AZOC5 rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:KFC75308.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;
alpha/beta hydrolase
scnpilot_expt_750_bf_scaffold_497_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24872..25750
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031313BE
Putative esterase of the alpha-beta hydrolase superfamily protein {ECO:0000313|EMBL:KFC75309.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; B
patatin
scnpilot_expt_750_bf_scaffold_497_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25710..26471)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00036DD8A7
Putative transcriptional regulator {ECO:0000313|EMBL:KFC75310.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.
ArsR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_497_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26577..27320
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQ76_AZOBR
Putative membrane protein {ECO:0000313|EMBL:KFC75311.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
Displaying items 1-30 of 141 in total

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