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scnpilot_expt_750_bf_scaffold_857

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_857_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1362)
DNA (1362bp) protein (454aa)
DNA segregation ATPase, FtsK/SpoIIIE family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYY1_9RHIZ
DNA segregation ATPase, FtsK/SpoIIIE family {ECO:0000313|EMBL:EIM29173.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Mic
cell division protein FtsK
scnpilot_expt_750_bf_scaffold_857_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1524..2879)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037763E0 rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Mi
amt; ammonium transporter
scnpilot_expt_750_bf_scaffold_857_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2908..3246)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYX6_9RHIZ
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KFC68117.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
nitrogen regulatory protein P-II
scnpilot_expt_750_bf_scaffold_857_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3482..4351)
DNA (870bp) protein (290aa)
Acyl-CoA thioesterase {ECO:0000313|EMBL:KFC68118.1}; EC=3.1.2.2 {ECO:0000313|EMBL:KFC68118.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bo
acyl-CoA thioesterase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F7996E rbh
acyl-CoA thioesterase II
scnpilot_expt_750_bf_scaffold_857_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4492..5715
DNA (1224bp) protein (408aa)
2-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036387CA rbh
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase {ECO:0000313|EMBL:KFC68119.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bose
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
scnpilot_expt_750_bf_scaffold_857_6
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5990..6187)
DNA (198bp) protein (66aa)
UPF0434 protein Bind_2731 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJS8_BEII9
hypothetical protein
UPF0434 protein Bind_2731 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia in
scnpilot_expt_750_bf_scaffold_857_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6198..11039)
DNA (4842bp) protein (1614aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036603D8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC68121.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NAD-glutamate dehydrogenase
scnpilot_expt_750_bf_scaffold_857_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11152..11769
DNA (618bp) protein (206aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Br
Uncharacterized peroxidase-related enzyme n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ICZ8_METNO rbh
peroxidase-like protein
scnpilot_expt_750_bf_scaffold_857_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12087..12455
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMV2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC68123.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_857_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12465..12998)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037AE056
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KFC68124.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phosphinothricin acetyltransferase
scnpilot_expt_750_bf_scaffold_857_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13091..13864)
DNA (774bp) protein (258aa)
membrane protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034B4810 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC68125.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_857_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14007..16595)
DNA (2589bp) protein (863aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMU7_9RHIZ rbh
Putative inner membrane protein {ECO:0000313|EMBL:KFC68127.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_857_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16598..17299)
DNA (702bp) protein (234aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMU6_9RHIZ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFC68128.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85
ABC transporter-like protein
scnpilot_expt_750_bf_scaffold_857_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17306..18046
DNA (741bp) protein (247aa)
acyl-CoA thioesterase (tesA-like) (EC:3.1.1.2)
Lysophospholipase L1-like esterase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMU5_9RHIZ
Putative esterase {ECO:0000313|EMBL:KFC68129.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_expt_750_bf_scaffold_857_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18127..19182
DNA (1056bp) protein (352aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMU4_9RHIZ rbh
Putative oxidoreductase, NADP(H)-dependent aldo-keto reductase {ECO:0000313|EMBL:KFC68130.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bose
aldo/keto reductase
scnpilot_expt_750_bf_scaffold_857_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19307..19882
DNA (576bp) protein (192aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1502851 species="B
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003641ECE
2'-5' RNA ligase
scnpilot_expt_750_bf_scaffold_857_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19879..20175
DNA (297bp) protein (99aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=PHS_BRASO
scnpilot_expt_750_bf_scaffold_857_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20182..20928)
DNA (747bp) protein (249aa)
Pseudouridine synthase {ECO:0000313|EMBL:KFC68135.1}; EC=5.4.99.- {ECO:0000313|EMBL:KFC68135.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
Pseudouridine synthase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZDT3_METPB rbh
pseudouridine synthase
scnpilot_expt_750_bf_scaffold_857_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20999..22267
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F11F8C rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria
signal recognition particle-docking protein FtsY
scnpilot_expt_750_bf_scaffold_857_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22264..22908
DNA (645bp) protein (215aa)
Probable intracellular septation protein A n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U8N1_METS4
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhi
intracellular septation protein A
scnpilot_expt_750_bf_scaffold_857_21
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22977..23390
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NZD4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF43284.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
hypothetical protein
scnpilot_expt_750_bf_scaffold_857_22
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23387..24097
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RUD3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD85560.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_857_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24101..24886)
DNA (786bp) protein (262aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ED3F6A rbh
Phosphoribosyl-AMP cyclohydrolase {ECO:0000313|EMBL:KFC62909.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;
3-hydroxy-2-methylbutyryl-CoA dehydrogenase
scnpilot_expt_750_bf_scaffold_857_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25067..25441
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMW2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC62910.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_857_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25445..26419)
DNA (975bp) protein (325aa)
NADPH:quinone oxidoreductase n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003820A81 rbh
NADPH2:quinone reductase {ECO:0000313|EMBL:KFC62911.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
alcohol dehydrogenase zinc-binding domain-containing protein
scnpilot_expt_750_bf_scaffold_857_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26610..27218
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FBCC0E
Uncharacterized protein {ECO:0000313|EMBL:KFC62912.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_857_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27345..28574
DNA (1230bp) protein (410aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003629DC2 rbh
radical SAM protein
scnpilot_expt_750_bf_scaffold_857_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28581..29063
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMX0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC62914.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_expt_750_bf_scaffold_857_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29067..30803)
DNA (1737bp) protein (579aa)
Gamma-glutamyltransferase {ECO:0000313|EMBL:KFC62915.1}; EC=2.3.2.2 {ECO:0000313|EMBL:KFC62915.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae
Gamma-glutamyltranspeptidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YU17_9RHIZ rbh
ggt; gamma-glutamyltranspeptidase
scnpilot_expt_750_bf_scaffold_857_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30931..31485
DNA (555bp) protein (185aa)
LemA family protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IKL6_METNO
LemA family protein {ECO:0000313|EMBL:KFC62916.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LemA family protein
Displaying 30 items

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