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scnpilot_expt_750_bf_scaffold_373_268

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

near complete RP 50 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 291571..292182

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI00036FAD78 similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 195.0
  • Bit_score: 262
  • Evalue 2.80e-67
transmembrane-associated alkaline phosphatase similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 188.0
  • Bit_score: 256
  • Evalue 7.40e-66
Uncharacterized protein {ECO:0000313|EMBL:GAJ92888.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 188.0
  • Bit_score: 256
  • Evalue 3.70e-65

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGCTGAAGCGCCTCTACGAATGGACCATGTCGCTCGCGGCCCGGCCCCGCGCCAAGCTGTGGCTGGCGATCGTCGCCTTCGTCGAGAGCTCCTTCTTCCTGATCCCGGCCGATGTGCTGTTCGTGCCGATGGCGCTGGCGCGGCCGATGCGGGCCTATCGGCTGGCGCTGATCGCGACCACCTTCTCCGTGCTCGGCGGGATCATGGGCTATGCCATCGGCTACTACGCCTTCGAGGCGCTGGCGAGGCCGGTGCTGGAATTCTATGGCAAGCTCGGCGCCTTCGAGACATTGCGCGCCTGCGCCGGACCGGACACCACGCTGATCCTGCTGACGACCTCGGGGCTCGCCCATCTGCCCCCGATCAAGGTCGTCACGATTCTGGCCGGAGCCGTGCACATCGGCCTGGCCTTCTTCGTCATCTCCTGCGTGCTCGCGCGTGGGGCGCGGTTTTTCGCGCTCGCGTTTCTGCTCCGGCGCTATGGCGACACGATCCGCCACTTCATCGAACGTCGCCTGAAAGTGATCGCCGTCATGGCGGCCGGCCTACTGATTCTGCTTTATTTCGGCCTCAAGCTGGTCGCAGGGTCTGGCCAGCTTCTCTCCTGCTGA
PROTEIN sequence
Length: 204
MLKRLYEWTMSLAARPRAKLWLAIVAFVESSFFLIPADVLFVPMALARPMRAYRLALIATTFSVLGGIMGYAIGYYAFEALARPVLEFYGKLGAFETLRACAGPDTTLILLTTSGLAHLPPIKVVTILAGAVHIGLAFFVISCVLARGARFFALAFLLRRYGDTIRHFIERRLKVIAVMAAGLLILLYFGLKLVAGSGQLLSC*