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scnpilot_expt_750_bf_scaffold_1091

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1091_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2..163
DNA (162bp) protein (54aa)
RagB/SusD domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZN6_DYAFD
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ACT93514.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain AT
scnpilot_expt_750_bf_scaffold_1091_2
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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255..1070
DNA (816bp) protein (272aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Niabella soli DSM 19437 RepID=H1NT35_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ21574.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
phytanoyl-CoA dioxygenase
scnpilot_expt_750_bf_scaffold_1091_3
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1115..1903
DNA (789bp) protein (263aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZP0_DYAFD
Uncharacterized protein {ECO:0000313|EMBL:ETZ23766.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
xylose isomerase domain-containing protein
scnpilot_expt_750_bf_scaffold_1091_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1985..4402
DNA (2418bp) protein (806aa)
Alpha-L-rhamnosidase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZN7_DYAFD rbh
alpha-L-rhamnosidase rbh
Alpha-L-rhamnosidase {ECO:0000313|EMBL:ACT93515.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermen
scnpilot_expt_750_bf_scaffold_1091_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4555..5550
DNA (996bp) protein (332aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacter
ADP-glyceromanno-heptose 6-epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNP2_NIAKG
ADP-glyceromanno-heptose 6-epimerase
scnpilot_expt_750_bf_scaffold_1091_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5553..6353
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
Pyrroline-5-carboxylate reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNP1_NIAKG
pyrroline-5-carboxylate reductase
scnpilot_expt_750_bf_scaffold_1091_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6548..9352)
DNA (2805bp) protein (935aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370BF3F rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99337.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_expt_750_bf_scaffold_1091_8
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9381..9689)
DNA (309bp) protein (103aa)
XRE family transcriptional regulator n=1 Tax=Pedobacter arcticus RepID=UPI0003702659
XRE family transcriptional regulator Tax=GWF2_Bacteroidetes_38_335_curated
XRE family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1091_9
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9670..10023)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000373EE6A
hypothetical protein Tax=GWF2_Bacteroidetes_35_48_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1091_10
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10197..10949
DNA (753bp) protein (251aa)
Two-component system-Response regulator n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L1D8_ZOBGA
two-component system-response regulator
Tax=BJP_IG2102_Flavobacteriales_34_12
scnpilot_expt_750_bf_scaffold_1091_11
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11073..12167
DNA (1095bp) protein (365aa)
sugar:proton symporter n=1 Tax=Pedobacter agri RepID=UPI000299D9BA
Sugar:proton symporter {ECO:0000313|EMBL:KIA92637.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungh
RhaT l-rhamnose-proton symport 2
scnpilot_expt_750_bf_scaffold_1091_12
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12190..12825
DNA (636bp) protein (212aa)
short-chain dehydrogenase n=1 Tax=Pedobacter agri RepID=UPI00029B142B
Short-chain dehydrogenase {ECO:0000313|EMBL:KIA92638.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyu
short chain dehydrogenase
Displaying 12 items

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