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scnpilot_expt_750_bf_scaffold_1163

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1163_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(251..1309)
DNA (1059bp) protein (353aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Niabella soli DSM 19437 RepID=H1NNE3_9SPHI
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHF15300.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19
scnpilot_expt_750_bf_scaffold_1163_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1306..2571)
DNA (1266bp) protein (422aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; C
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAL8_CHIPD
PAS/PAC sensor signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_1163_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2831..3295
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6T2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97935.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_expt_750_bf_scaffold_1163_4
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3295..3573
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SDH5_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY53958.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedob
scnpilot_expt_750_bf_scaffold_1163_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3576..3980)
DNA (405bp) protein (135aa)
Cytochrome c family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKD7_9SPHI
cytochrome C
Cytochrome C {ECO:0000313|EMBL:AHF16942.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_expt_750_bf_scaffold_1163_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3970..4245)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKD6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC95487.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_1163_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4242..5252)
DNA (1011bp) protein (337aa)
Cytochrome C oxidase mono-heme subunit/FixO n=1 Tax=Niabella soli DSM 19437 RepID=H1NKD5_9SPHI
Cytochrome C oxidase {ECO:0000313|EMBL:KIC95488.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter s
cytochrome C oxidase
scnpilot_expt_750_bf_scaffold_1163_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5263..7407)
DNA (2145bp) protein (715aa)
Cytochrome-c oxidase n=1 Tax=Niabella soli DSM 19437 RepID=H1NKD4_9SPHI
cytochrome oxidase subunit I
Cytochrome oxidase subunit I {ECO:0000313|EMBL:AHF16945.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM
scnpilot_expt_750_bf_scaffold_1163_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7453..7884)
DNA (432bp) protein (144aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Niabella soli DSM 19437 RepID=H1NKD3_9SPHI
Rrf2 family transcriptional regulator
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:AHF16946.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella
scnpilot_expt_750_bf_scaffold_1163_10
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8094..8420)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4Z0_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY54164.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedob
scnpilot_expt_750_bf_scaffold_1163_11
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8417..9685)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4Y9_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY54163.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedob
scnpilot_expt_750_bf_scaffold_1163_12
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9714..10535)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4Y8_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:KEY17830.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
scnpilot_expt_750_bf_scaffold_1163_13
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10590..11525)
DNA (936bp) protein (312aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4Y7_PEDSD
hemerythrin hhE cation binding domain-containing protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:ADY54161.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.
Displaying 13 items

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