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scnpilot_expt_750_bf_scaffold_467

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_467_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..433)
DNA (432bp) protein (144aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAU3_NIAKG
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AEW00286.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="
scnpilot_expt_750_bf_scaffold_467_2
unknown

Not on your lists

comp(1005..1835)
DNA (831bp) protein (277aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_467_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2012..2920)
DNA (909bp) protein (303aa)
Uncharacterized protein id=4420209 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S rbh
metallophosphoesterase Tax=GWF2_Lentisphaerae_50_93_curated
metallophosphoesterase
scnpilot_expt_750_bf_scaffold_467_4
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3176..4354
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D4DBBC rbh
Uncharacterized protein {ECO:0000313|EMBL:EEV87330.1}; Flags: Fragment;; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;"
glycoside hydrolase family protein
scnpilot_expt_750_bf_scaffold_467_5
unknown

Not on your lists

comp(4556..4975)
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_467_6
unknown

Not on your lists

comp(5041..5463)
DNA (423bp) protein (141aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_467_7
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5857..8001
DNA (2145bp) protein (715aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EML4_RUNSL rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI50985.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformi
scnpilot_expt_750_bf_scaffold_467_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8313..9668
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000366867D
sulfatase
Sulfatase {ECO:0000313|EMBL:ACU60085.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
scnpilot_expt_750_bf_scaffold_467_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9680..12088)
DNA (2409bp) protein (803aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC89_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00396.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_expt_750_bf_scaffold_467_10
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12330..14084)
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003660D76
signal transduction histidine kinase Tax=RBG_13_Deltaproteobacteria_47_9_curated
sensory box protein
scnpilot_expt_750_bf_scaffold_467_11
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

14379..15740
DNA (1362bp) protein (454aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineacea
tryptophan synthase subunit beta n=1 Tax=Rudanella lutea RepID=UPI0003712D11
trpB; tryptophan synthase beta chain
scnpilot_expt_750_bf_scaffold_467_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15950..16357)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO45098.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_467_13
unknown

Not on your lists

comp(16441..17130)
DNA (690bp) protein (230aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_467_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17163..17717)
DNA (555bp) protein (185aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT1_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW03102.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc
scnpilot_expt_750_bf_scaffold_467_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17738..18694)
DNA (957bp) protein (319aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000313|EMBL:AEW03105.1}; EC=2.2.1.7 {ECO:0000313|EMBL:AEW03105.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; C
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT4_NIAKG rbh
1-deoxy-D-xylulose-5-phosphate synthase
scnpilot_expt_750_bf_scaffold_467_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18725..19783)
DNA (1059bp) protein (353aa)
UDP-galactose 4-epimerase {ECO:0000313|EMBL:AEW03106.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AEW03106.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagacea
UDP-galactose 4-epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT5_NIAKG
UDP-galactose 4-epimerase
scnpilot_expt_750_bf_scaffold_467_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19801..20661)
DNA (861bp) protein (287aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteri
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT6_NIAKG rbh
glucose-1-phosphate thymidylyltransferase
scnpilot_expt_750_bf_scaffold_467_18
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20748..21941)
DNA (1194bp) protein (398aa)
Phosphate transporter id=4204635 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
phosphate transporter; K03306 inorganic phosphate transporter, PiT family Tax=GWF2_Bacteroidetes_38_335_curated
phosphate transporter
scnpilot_expt_750_bf_scaffold_467_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22012..22641)
DNA (630bp) protein (210aa)
Putative phosphate transport regulator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT8_NIAKG
Phosphate transport regulator {ECO:0000313|EMBL:KIC94553.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihum
putative phosphate transport regulator
scnpilot_expt_750_bf_scaffold_467_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22893..25652
DNA (2760bp) protein (920aa)
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMU1_NIAKG rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:AEW03112.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc
TonB-dependent receptor plug
scnpilot_expt_750_bf_scaffold_467_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25682..27151
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMU2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03113.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_expt_750_bf_scaffold_467_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27337..27624)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS9_NIAKG
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
scnpilot_expt_750_bf_scaffold_467_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27744..27998
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01826.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_expt_750_bf_scaffold_467_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27999..28289)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS7_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC92841.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_467_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28308..30737)
DNA (2430bp) protein (810aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS6_NIAKG
phenylalanyl-tRNA synthetase subunit beta
scnpilot_expt_750_bf_scaffold_467_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31205..32767
DNA (1563bp) protein (521aa)
Primary replicative DNA helicase {ECO:0000313|EMBL:AEW01822.1}; EC=3.6.1.- {ECO:0000313|EMBL:AEW01822.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinop
Primary replicative DNA helicase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS4_NIAKG rbh
primary replicative DNA helicase
scnpilot_expt_750_bf_scaffold_467_27
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32904..35003
DNA (2100bp) protein (700aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacteri
multi-sensor signal transduction histidine kinase id=7718893 bin=BACIGN_2 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
multi-sensor signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_467_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35099..36886
DNA (1788bp) protein (596aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphi
DNA polymerase IV n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQL3_NIAKG rbh
DNA polymerase IV
scnpilot_expt_750_bf_scaffold_467_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36971..37606
DNA (636bp) protein (212aa)
1-Cys peroxiredoxin {ECO:0000313|EMBL:AEW03262.1}; EC=1.11.1.15 {ECO:0000313|EMBL:AEW03262.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; N
1-Cys peroxiredoxin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQL5_NIAKG rbh
1-Cys peroxiredoxin
scnpilot_expt_750_bf_scaffold_467_30
Bacteriovorax sp. Seq25_V, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37779..38303
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Bacteriovorax sp. Seq25_V RepID=T0R5I4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EQC45709.1}; TaxID=1201288 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovor
bpH1; histone protein
Displaying items 1-30 of 119 in total

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