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scnpilot_expt_750_bf_scaffold_478

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_478_1
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(602..1051)
DNA (450bp) protein (150aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQZ9_9FLAO
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ESU28879.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source=
activator of Hsp90 ATPase 1 family protein
scnpilot_expt_750_bf_scaffold_478_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1105..1581)
DNA (477bp) protein (159aa)
3-demethylubiquinone-9 3-methyltransferase
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:AIC17162.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sourc
3-demethylubiquinone-9 3-methyltransferase id=53588 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
scnpilot_expt_750_bf_scaffold_478_3
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(1616..2023)
DNA (408bp) protein (136aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTR2_HALH1
glyoxalase/bleomycin resistance protein/dioxygenase; K04750 PhnB protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_expt_750_bf_scaffold_478_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2153..3142
DNA (990bp) protein (330aa)
AraC family transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI00036205B2
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT92578.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
scnpilot_expt_750_bf_scaffold_478_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3166..5490)
DNA (2325bp) protein (775aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:S
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=METE_FLAJ1
scnpilot_expt_750_bf_scaffold_478_6
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5985..6446
DNA (462bp) protein (154aa)
AsnC family transcriptional regulator n=1 Tax=Pedobacter agri RepID=UPI00029A52D8
AsnC family transcriptional regulator {ECO:0000313|EMBL:KDN54318.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flav
AsnC/Lrp family regulatory protein
scnpilot_expt_750_bf_scaffold_478_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6536..8245)
DNA (1710bp) protein (570aa)
Ribonucleoside-diphosphate reductase, alpha chain {ECO:0000313|EMBL:ACU60898.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ACU60898.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobac
Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTA8_CHIPD
ribonucleotide-diphosphate reductase subunit alpha
scnpilot_expt_750_bf_scaffold_478_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8282..9256)
DNA (975bp) protein (325aa)
Ribonucleotide reductase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTA9_CHIPD
ribonucleotide reductase
Ribonucleotide reductase {ECO:0000313|EMBL:ACU60899.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pine
scnpilot_expt_750_bf_scaffold_478_9
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9710..10612
DNA (903bp) protein (301aa)
Putative hydrolase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JV58_9BACT
Putative hydrolase {ECO:0000313|EMBL:ELR72906.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
alpha/beta hydrolase
scnpilot_expt_750_bf_scaffold_478_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10689..11159)
DNA (471bp) protein (157aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR63_CHIPD
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACU64302.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophaga
scnpilot_expt_750_bf_scaffold_478_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11617..13761)
DNA (2145bp) protein (715aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365859B rbh
hydrolase
Hydrolase {ECO:0000313|EMBL:AHF16462.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_expt_750_bf_scaffold_478_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13898..15439)
DNA (1542bp) protein (514aa)
Ribonuclease, Rne/Rng family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNU1_NIAKG rbh
ribonuclease, Rne/Rng family
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:AEW02026.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
scnpilot_expt_750_bf_scaffold_478_13
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15576..15671)
DNA (96bp) protein (32aa)
Uncharacterized protein n=4 Tax=Bacteroidetes RepID=H6L6P8_SAPGL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC25294.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (st
scnpilot_expt_750_bf_scaffold_478_14
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15703..16533)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003765B76
Uncharacterized protein {ECO:0000313|EMBL:GAO41839.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_478_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16580..16912)
DNA (333bp) protein (111aa)
Histone family protein DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNT8_NIAKG
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:AEW02023.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_expt_750_bf_scaffold_478_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17143..18216
DNA (1074bp) protein (358aa)
A/G-specific DNA-adenine glycosylase {ECO:0000313|EMBL:AEW02022.1}; EC=3.2.2.- {ECO:0000313|EMBL:AEW02022.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chit
A/G-specific DNA-adenine glycosylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNT7_NIAKG rbh
A/G-specific DNA-adenine glycosylase
scnpilot_expt_750_bf_scaffold_478_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18254..18685
DNA (432bp) protein (144aa)
Single-stranded DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNT5_NIAKG
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphin
scnpilot_expt_750_bf_scaffold_478_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18777..20120
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365DF92 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO41835.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
gliding motility-associated protein GldE
scnpilot_expt_750_bf_scaffold_478_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20237..20875
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNT3_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC96057.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_478_20
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21074..21610
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JHA7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR68200.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_478_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21614..21841
DNA (228bp) protein (76aa)
Transcriptional regulator, XRE family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBR9_CHIPD
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACU63133.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chit
scnpilot_expt_750_bf_scaffold_478_22
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21903..22484
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BEA20
Uncharacterized protein {ECO:0000313|EMBL:KIC89705.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_478_23
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22662..23981
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMM7_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC89703.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_478_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24096..24674)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIG9_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58158.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
scnpilot_expt_750_bf_scaffold_478_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24874..25464)
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7M2_NIAKG
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEW02277.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niaste
scnpilot_expt_750_bf_scaffold_478_26
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25529..27025)
DNA (1497bp) protein (499aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1A0_SPHS2 rbh
cysteinyl-tRNA synthetase
scnpilot_expt_750_bf_scaffold_478_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27107..28255)
DNA (1149bp) protein (383aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7N8_NIAKG
endonuclease/exonuclease/phosphatase Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
endonuclease/exonuclease/phosphatase
scnpilot_expt_750_bf_scaffold_478_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28265..29188)
DNA (924bp) protein (308aa)
Rhomboid family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7N9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC95239.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
rhomboid family protein
scnpilot_expt_750_bf_scaffold_478_29
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(29225..29941)
DNA (717bp) protein (239aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Uncharacterized protein id=3963156 bin=GWF2_Bacteroidetes_41_31 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
scnpilot_expt_750_bf_scaffold_478_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30094..31515)
DNA (1422bp) protein (474aa)
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:AEW02296.1}; EC=2.1.1.- {ECO:0000313|EMBL:AEW02296.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chi
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7P1_NIAKG rbh
23S rRNA m(5)U-1939 methyltransferase
Displaying items 1-30 of 46 in total

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