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scnpilot_expt_750_bf_scaffold_595

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_595_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(449..2143)
DNA (1695bp) protein (565aa)
SSS sodium solute transporter superfamily n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KX40_HALH1 rbh
sodium solute transporter superfamily protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
sodium solute transporter superfamily protein
scnpilot_expt_750_bf_scaffold_595_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2182..3684)
DNA (1503bp) protein (501aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=700598 species="Bacteria; Ba
arabinose isomerase n=1 Tax=Segetibacter koreensis RepID=UPI000382F0DB rbh
L-arabinose isomerase
scnpilot_expt_750_bf_scaffold_595_3
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3720..4415)
DNA (696bp) protein (232aa)
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:ADZ77600.1}; EC=5.1.3.4 {ECO:0000313|EMBL:ADZ77600.1};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphing
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CCR4_SPHS2 rbh
L-ribulose-5-phosphate 4-epimerase rbh
scnpilot_expt_750_bf_scaffold_595_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4495..6132)
DNA (1638bp) protein (546aa)
Ribulokinase {ECO:0000256|RuleBase:RU003455, ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|RuleBase:RU003455, ECO:0000256|SAAS:SAAS00183333};; TaxID=700598 species="Bacteria; Bacteroidetes;
Ribulokinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPU0_NIAKG rbh
L-ribulokinase
scnpilot_expt_750_bf_scaffold_595_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6189..6899)
DNA (711bp) protein (237aa)
NUDIX hydrolase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2N3_9SPHI
NUDIX hydrolase Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
NUDIX hydrolase
scnpilot_expt_750_bf_scaffold_595_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7108..9309)
DNA (2202bp) protein (734aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8F1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99121.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_expt_750_bf_scaffold_595_7
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9552..11180)
DNA (1629bp) protein (543aa)
Sodium/nucleoside co-transporter permease NupC n=1 Tax=Flavobacteria bacterium (strain BBFL7) RepID=Q26I40_FLABB rbh
Nucleoside permease NupX {ECO:0000313|EMBL:KHJ36916.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter gluc
nupC; sodium/nucleoside co-transporter permease
scnpilot_expt_750_bf_scaffold_595_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11346..12635)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7MEA7_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01361.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_expt_750_bf_scaffold_595_9
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12694..13728)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B57E00
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48670.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformi
scnpilot_expt_750_bf_scaffold_595_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13995..15323)
DNA (1329bp) protein (443aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIZ6_NIAKG rbh
adenosylhomocysteinase
scnpilot_expt_750_bf_scaffold_595_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15477..15977
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BC515
transcriptional regulator, AsnC family Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
AsnC family transcriptional regulator
scnpilot_expt_750_bf_scaffold_595_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16074..16592
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97371.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_expt_750_bf_scaffold_595_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


16837..18684
DNA (1848bp) protein (616aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AEV96531.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AEV96531.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagacea
Aspartate--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK97_NIAKG
aspartyl-tRNA synthetase
scnpilot_expt_750_bf_scaffold_595_14
unknown

Not on your lists

18690..19169
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_595_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19419..20600)
DNA (1182bp) protein (394aa)
Amidohydrolase {ECO:0000313|EMBL:AEV96551.1}; EC=3.5.1.47 {ECO:0000313|EMBL:AEV96551.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastel
Amidohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLI2_NIAKG rbh
amidohydrolase
scnpilot_expt_750_bf_scaffold_595_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20703..21113)
DNA (411bp) protein (137aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=929713 specie
Holliday junction resolvase n=1 Tax=Niabella aurantiaca RepID=UPI0003716BB9
Holliday junction resolvase
scnpilot_expt_750_bf_scaffold_595_17
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21180..22361)
DNA (1182bp) protein (394aa)
Abortive infection protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMH2_RUNSL
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:AEI50943.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 2
scnpilot_expt_750_bf_scaffold_595_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22403..23329)
DNA (927bp) protein (309aa)
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI77_NIAKG
4-hydroxybenzoate polyprenyltransferase {ECO:0000313|EMBL:KIC93369.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source
4-hydroxybenzoate octaprenyltransferase
scnpilot_expt_750_bf_scaffold_595_19
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23420..23917)
DNA (498bp) protein (166aa)
azurin n=1 Tax=Dyadobacter beijingensis RepID=UPI00037BC3FC
blue (type1) copper domain-containing protein
Azurin {ECO:0000313|EMBL:KFF05988.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
scnpilot_expt_750_bf_scaffold_595_20
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24281..25282
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00038271F8
AraC family transcriptional regulator {ECO:0000313|EMBL:KGO86925.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flav
AraC family transcriptional regulator
scnpilot_expt_750_bf_scaffold_595_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25664..26014)
DNA (351bp) protein (117aa)
Heavy metal transport/detoxification protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ30_NIAKG
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:AEV97547.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Ni
scnpilot_expt_750_bf_scaffold_595_22
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26076..26726)
DNA (651bp) protein (217aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
Orotate phosphoribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ29_NIAKG
orotate phosphoribosyltransferase
scnpilot_expt_750_bf_scaffold_595_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26735..27358
DNA (624bp) protein (208aa)
NUDIX hydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ28_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC93623.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
NUDIX hydrolase
scnpilot_expt_750_bf_scaffold_595_24
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27400..28785
DNA (1386bp) protein (462aa)
Aldehyde dehydrogenase n=1 Tax=Microcystis aeruginosa PCC 9807 RepID=I4H308_MICAE
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibact
aldehyde dehydrogenase
scnpilot_expt_750_bf_scaffold_595_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28788..29231)
DNA (444bp) protein (148aa)
Phenylacetic acid degradation-related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ27_NIAKG
phenylacetic acid degradation-related protein
Phenylacetic acid degradation-related protein {ECO:0000313|EMBL:AEV97544.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source=
scnpilot_expt_750_bf_scaffold_595_26
unknown

Not on your lists

29312..29602
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_595_27
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29635..30405
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003752705
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADB39333.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (
scnpilot_expt_750_bf_scaffold_595_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30430..33297)
DNA (2868bp) protein (956aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMA1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00883.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
Displaying 28 items

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